Candidatus Vallotia laricis: GKR41_00607
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Entry
GKR41_00607 CDS
T07905
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vla
Candidatus Vallotia laricis
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vla03032
]
GKR41_00607 (gyrA)
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00607 (gyrA)
Enzymes [BR:
vla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GKR41_00607 (gyrA)
DNA replication proteins [BR:
vla03032
]
Prokaryotic type
DNA Topoisomerases
GKR41_00607 (gyrA)
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GKR41_00607 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPP1
Motif
Other DBs
NCBI-ProteinID:
UDG83217
LinkDB
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Position
complement(817846..820422)
Genome browser
AA seq
858 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMYELGNDWN
RTYKKSARIVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIGHELLTDIDKDTVDFEWNYDGSETQPQVLPSRIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDVCQYLLNHPQASIHELIELLPAPDFPTGGVIYGVQGVRDGYSFGRGRI
IIRAKIHFEEIERGQRIAIVVDELPYQVNKRSLLERIAELVNEKKIDGISDIRDESDKSG
MRVVIELKRSEVPEVVLNNLYKNTQLQDTFGMNMVALINGQPKLLNLRELLECFLSHRRE
VVTRRAFYDLRRARERSHVLEGLAVALSNIDKFIEIIRAASTPPIARRDLMMRGWDSGLV
RDMLSRTQSETPGGLDAFRPDGLAPIFGMQSQGLYKLSDIQVQETLQMRLQRLTGLEKDK
ITTEYYTVTTKISDLLNILSKPERIRAIISDELVAIKAEFGNGRRSQIALNTTDLSTEDL
IVPQDMVVTMSHAGYIKSQPLSEYDAQKRGGRGKQAIVMKDDDWAETLFIANTHDHILCF
SNHGRVYWIKVYEVPRGSRNSRGRPIVNMFPLQEGEKINVALPVKEFSADKFVFLATSLG
IVKKTPLEAFSRPLKKGIIAVGLDDGDFLIGAQITNGQHDVMLFSDAGKAVRFEENDVRP
MGREARGVRGMQLENSQQVIALLVAGGESQSVLTATENGYGKRTPISEYTRHGRGTKGMI
AIQTSERNGSVVAATLVEPDSEIILITTAGVMIRTRVTEIREMSRATQGVTLITLDRGTK
LSGLQQIAETDIENSIEP
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagaccctacccatttctctcgaagaggaaatgcgccgttct
tacctcgattatgcaatgagcgtaatagtaggtcgtgcactgcccgatgctcgagatgga
ctcaaaccagtgcatcgccgcgtgctttatgcgatgtatgagctcggcaatgactggaat
cgaacatacaagaaatctgcccggatcgtcggagatgtaattggtaagtaccacccccat
ggcgatagcgcagtttatgagaccatcgtccgcatggctcaggatttttcgctacgctat
atgctagtagacggacagggaaacttcggctcggtcgatggcgataacgctgcggcaatg
cgctacactgagattaggctcgcaaaaattggtcatgagctattaaccgacatcgataag
gataccgttgactttgagtggaactatgatggcagcgagactcaaccgcaggtgctgccg
tcgagaatcccgaatctgttaatcaacggatcgtctggtattgcagtcggtatggcaacg
aatatccccccacataatttgaatgaagttgttgacgtatgccaatacctgctaaaccat
ccacaggcgtcaatccatgagctgattgaactccttcctgcaccagatttcccaacgggg
ggggtgatatacggcgtgcaaggtgtgcgcgatggatatagcttcggccgcggccgaatt
ataatacgcgctaagattcatttcgaggaaatcgagcgcgggcagcgtatagcgatcgtc
gttgacgaattaccatatcaggtaaacaaacgttccctgcttgagcgcattgctgaatta
gtcaacgagaagaagattgatggtatatccgatatccgtgatgaatctgacaaaagtggt
atgcgtgtggtgattgaacttaagcgtagtgaagttccggaggttgtgcttaataattta
tataagaatacgcagctgcaggatacttttggtatgaatatggttgcactgatcaatggg
caaccgaagctattaaatttacgcgagctactggagtgctttttatcacaccggcgtgag
gttgttacacgccgcgctttttacgatttacgtcgagctcgcgagcgaagtcatgttctg
gaaggcctcgcggttgcactttcaaatatcgataagtttattgagattatccgagccgct
tcgacaccaccaattgcaaggcgagatttaatgatgcgtggatgggactcggggctagtg
cgggacatgctttcgcgcacccaaagtgaaaccccgggtgggctcgatgcgttccgtccc
gatgggttagcacccatttttggtatgcaatcccagggactttacaagctctcggatata
caggtgcaggaaaccctacagatgcgattgcaaagattaacgggcctagaaaaagataaa
attactacagaatattatacggttactacaaagatttcggatcttctgaatattctatct
aaacctgaacggatccgagcgatcatctctgatgagctagttgcaatcaaggcggaattt
ggaaacgggaggcgctcgcagattgcgttgaatactaccgatcttagcactgaggatctg
attgtgccgcaagatatggttgttacgatgtcgcacgctggctacattaaatcgcagccg
ctatctgagtacgatgcgcaaaagcgcggtggacgtggaaagcaggctattgtaatgaaa
gacgatgattgggccgagacactatttattgcaaacacgcatgaccatattttatgcttc
tcaaatcacggacgtgtttattggattaaagtctatgaggtaccgcgaggctcaagaaac
tcccgaggacgaccaatcgtaaatatgtttccgctacaggaaggcgaaaagattaatgta
gcactaccggttaaggaattttctgctgacaagttcgtattcctagctacatcccttgga
atagtaaagaaaacgccgcttgaggcattttctcggccgcttaagaagggtatcattgca
gtagggcttgacgatggagattttctgatcggtgcgcagattactaatggacagcatgat
gtaatgctgttctccgacgctggcaaggcggtacgattcgaggagaacgatgtacggcca
atgggccgggaagcacgcggggtgcgtggaatgcaactcgaaaatagtcagcaggtaatc
gcgttactagtggctggtggcgagtcacaatcagtactaactgcgaccgagaacggttac
ggtaagcgcacaccaatctctgagtatacaagacatgggcgtggtacaaagggtatgatt
gcaattcagacctcggagcgaaacggcagtgtagttgccgcgacattagttgagccagac
agtgagatcatattaattacgactgctggtgtaatgatccgtacacgtgttactgaaatt
cgagagatgagccgtgcaacgcaaggtgttacactaattacccttgacaggggtaccaag
ctatcgggcttgcagcaaatagctgagactgacatagaaaatagcatcgagccctag
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