Candidatus Vallotia laricis: GKR41_00686
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Entry
GKR41_00686 CDS
T07905
Symbol
ruvB_2
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vla
Candidatus Vallotia laricis
Pathway
vla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GKR41_00686 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_00686 (ruvB_2)
Enzymes [BR:
vla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKR41_00686 (ruvB_2)
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GKR41_00686 (ruvB_2)
RecFOR pathway proteins
GKR41_00686 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
TIP49
DUF815
nSTAND3
Rad17
AAA_16
AAA_18
TsaE
AAA_14
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UDG83292
LinkDB
All DBs
Position
925948..927012
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AA seq
354 aa
AA seq
DB search
MIKTDKLVSERFISAIPASPNEETCEQTLRPQRLAEYIGQEKVRMQLEIFIEAAKRRSEA
LDHVLLFAPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTHLEMNDILFIDE
IHRLSPVVEEILYPALEDYQIDIMLGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDR
FGISARLEFYTASELTQIVERSAHLLGTKIESEGALEIARRSRGTPRIANRLLRRVRDYA
EIKSNGCITALIADAGLAMLDVDPVGFDLMDRKLLDAILHKFNGGPVGLDNLAAAIGEER
DTIEDMVEPYLIQQGYLQRTPRGRVATLLSYRYFGLTGRIQDESMTCGSLAENS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaacggataagcttgtctcagaacgctttatttcggcaattcccgcatcgcct
aatgaagaaacatgcgaacagactctgcgcccacagcgcttagctgaatatattgggcaa
gaaaaagttcgcatgcagctcgagatttttattgaagctgccaagcgccgatcagaagca
ctagatcatgttcttctgtttgcccctcctggtctaggcaagaccacgcttgcacacatt
atcgcacgagaaatgggcgttaatctgcgccagacatcggggccagtgcttgaacgggcc
ggcgacttagctgcactactgactcatctcgaaatgaacgatatattatttatcgacgag
atccatcgattgtcgccagtcgttgaagaaattttataccctgcgctcgaagattatcag
attgatattatgctcggagaggggccggcagcacgcagcattaagctagacctacagccg
tttacgctagtgggagccactactcgtgccggcatgctaactaacccattgcgagatcga
tttggaattagtgctcggcttgagttctatactgcgagcgagctaacacagatcgttgag
cgttcggcgcaccttctcggtacgaagattgagtctgaaggcgcactggaaatagcgcgg
cgctcacgcggcaccccacgtattgcgaatcggctgttacgtcgcgtgcgtgattatgct
gaaataaagtctaatggttgtatcacagcactaatagccgatgcaggattagcaatgctt
gatgttgatccggtaggctttgatttaatggaccgtaagcttctggacgcgatcctacat
aagtttaatggcggtccagtgggactagataaccttgctgctgcaattggtgaggaacgc
gatacaattgaagacatggttgagccctatttaattcagcaaggttatctgcagcgtacg
cctcgcggacgtgttgctacactgctttcctatcgttactttggccttactggccggata
caagatgagtccatgacctgtgggtcgttagcagaaaatagttaa
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