Candidatus Vallotia lariciata: GKR41_00716
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Entry
GKR41_00716 CDS
T07905
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vla
Candidatus Vallotia lariciata
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vla03021
]
GKR41_00716 (rpoH)
Transcription machinery [BR:
vla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GKR41_00716 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UDG83318
LinkDB
All DBs
Position
969224..970210
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AA seq
328 aa
AA seq
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MPGSSVFVAARKAVHTRNIRVCNEITLPTTTSESLVPARARALSAKSMLPGALGNLDSYI
QAVNRIPLLSQADETRLATEYREQNNLDAARELILSHLRLVVSVARNYMGYGLPHADLIQ
EGNIGLMKAVKRFDPRQNVRLVSYAIHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLR
SHKQGIQPFTPDEIAGLAKELNVKCEEVTEMERRLAGGDIVLETRFEDGEESFAPIAYLA
DSRTEPTAVLASRQSDLLQTEGLADALKSLDTRSRRIIEARWLHVQDDGSGGLTLHDLAD
EFGVSAERIRQIEASAMKKMRGTLLHYT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtagctccgtgttcgtagcagcacgtaaagctgtccacacaaggaatatacga
gtgtgtaatgaaataaccctaccgactacgacctctgaaagcctagtgccagcgagagct
cgggcgctttctgcaaagtcaatgcttccgggtgcattgggcaatctagattcctatatc
caggccgttaatcgtatcccgctgttatcgcaagctgatgaaacgcgtcttgcgaccgaa
tatcgcgagcaaaataatctagatgccgcacgcgagcttattctatcacatcttcggcta
gtcgtatcggtcgcacgcaactatatgggttacggtttaccgcatgcggacctaattcag
gaaggaaatattggcttgatgaaagccgtaaagcgcttcgacccgcgccagaatgtacga
ctagtgtcttatgcgattcattggattaaagccgaaattcacgaatacatccttcgtaac
tggcgaatggtaaaagtcgcgacgacaaaagcgcagcgcaagctgttctttaacctgcga
agccataaacaaggcattcaaccttttacaccggacgaaatcgcaggacttgcgaaggag
ctaaacgttaaatgtgaagaagtaactgagatggagagacgactagctggtggcgatatc
gtgctcgaaacacggttcgaagacggtgaggaatcattcgcacctattgcctacttagcg
gactcgcgtactgagccaactgcagtgctcgcttcacgacagagtgatcttctgcagaca
gagggtctggctgatgcacttaaatcacttgatacacgtagccgtcgtattatagaagcg
cgctggctgcatgtgcaggatgatggttcgggcggcttaacgcttcatgatctagcggac
gagttcggggtctctgctgagcgaattcgccaaattgaggcgagcgcaatgaaaaaaatg
cgcgggacgctactgcactacacatga
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