Candidatus Vallotia laricis: GKR41_00785
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Entry
GKR41_00785 CDS
T07905
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vla
Candidatus Vallotia laricis
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vla03032
]
GKR41_00785 (topB)
Enzymes [BR:
vla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GKR41_00785 (topB)
DNA replication proteins [BR:
vla03032
]
Prokaryotic type
DNA Topoisomerases
GKR41_00785 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
HypA
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
UDG83378
LinkDB
All DBs
Position
1052998..1055511
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AA seq
837 aa
AA seq
DB search
MSKALIISEKPTVSNDIARALGGFTKYAEYYESDDYILSSAAGHLVEIAAPQACTVKRGK
WSFANLPIIPPYFDLYPIAKSESRLNLLSRLIRRKDVDRLINACDAGREGELIFRLIVQY
VKSKRPLQRLWLQSMTPTSIRDGFAKLRSEQEMQPLADAARCRAEADWLVGINGTRAMTA
FNSKGGGFFLTTVGRVQTPTLSIVVDREKKIRRFLPCDYWEVKAEFLCAAGFYEGRWFDP
KFNKNESDAEQRDSRLWLAVMARKIVSACRGQKGTVSEESKSSMQLSPLLFDLTSLQREA
NGRFSFSAKQTLTLAQALYEKHKVLTYPRTDARALPEDYMTTVRNTLSVLKENHTYLPYA
QQVLDKGLVRSNKRIFNNVKISDHFAIIPTLQTPKNLSESEHKLYDLVVKRFLSVFFPAA
EYKITTRITKVAGHFFKTEGKILVKLGWLEVYGRRISSEDNNLTVIEKEEEIKTNKIVAK
PCTTKPPIRYNEATLLSAMEGAGKLVEDDELREAMAAKGLGTPATRAAIIEGLLSEKYML
RESRDLIPTAKAFQLMTLLHGLGVEELTSPELTGEWEHKLSQIEQGHLERAEFMHEIACI
TQTIVKRAKEYDSDTIPGDYATLEAPCPNCSNKVKENYRRFMCMKCDFSISKIPGGRQLE
IEEVERLLLEKAIGPLSGFRSKTGRPFSAILKLTCDEVVNHYKLGFNFEQDTAKDKHEIP
NFSLQEPIGQCPKCYGRVFWHGISYICENQVTHPKTCDFRAGRIILQQEITQEQMAKLLN
NGRTDLLTNFKSSRTGRNFKAFLIKQKDGSIGFEFEKKETLSRPIKKSLAYSKNNKQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagccttgatcatttctgaaaagccaactgtctcaaatgatatcgcacgcgcg
ctaggaggcttcacaaagtatgccgagtactatgagagtgatgattatatattatcatca
gctgccggccacttagtagagatcgcagcaccgcaggcgtgtacagtcaagcgcggaaaa
tggagttttgcgaatctgccaattattccgccctattttgacctttatccgattgccaag
agcgaatctcggctgaatttactgagccggctaatcagacgcaaggatgtcgaccgactg
attaatgcatgtgatgcaggacgcgaaggcgagttgatcttccgactaatcgttcagtac
gtaaaatctaagagacctttgcagcgtttatggctccagtcgatgacgccaacctcaatc
cgggacggctttgccaaattacgcagcgagcaagagatgcaaccgcttgccgatgcagcc
cgctgtcgcgctgaggctgattggctcgtgggaatcaatggcactcgggcgatgacagcg
ttcaacagtaagggtggcggcttctttctaactaccgtcggtcgcgttcagacacccaca
ctatcaattgttgtggaccgcgaaaagaaaattcgtcgtttcctaccgtgcgattactgg
gaagtaaaagccgaatttctatgtgcagctgggttttacgagggacgctggtttgatccg
aaatttaataaaaacgagtccgacgcagagcaacgtgactctagactctggcttgctgtg
atggctagaaaaattgtctcagcatgccgtggacaaaaaggaacagttagtgaggaatca
aaatcttcaatgcagctttcaccattactatttgatttaacgagcctgcaacgtgaagcg
aacggacgatttagtttttcagccaagcaaacgcttacactagctcaagccctctatgag
aagcataaggtattaacctatccacgtacagacgcacgtgcattacccgaagactatatg
actacggttcgcaatacgctcagcgtgcttaaagaaaaccatacctacttaccatatgct
cagcaggtacttgacaaaggcttggtccgatcgaacaagcgtatattcaataatgtaaaa
attagcgatcactttgcaattattccgacattacagacgcccaaaaacctatccgaatcg
gagcataagctatacgatttagtagtcaagagatttctatccgtattttttccggcggcg
gaatacaaaataacaacccggattacaaaagtggcgggtcatttttttaaaactgaaggc
aaaatattagtaaagcttggctggctagaggtgtacggccgcaggatatctagcgaagat
aacaacctaacggtgattgaaaaagaggaggagattaaaacaaacaagatcgtagcgaaa
ccttgtaccactaagccacctatccgctataacgaagctacgcttctctcggcaatggaa
ggggcgggtaagctagtagaggatgatgaattgcgtgaagcgatggcagccaagggccta
ggaacgccagctactcgggcggcgataattgaaggactgcttagtgaaaagtatatgctt
cgcgaaagccgcgatttaattccgacagctaaagcattccagctcatgactctgctccac
ggcctaggcgtcgaagagttaacctctccagagctcactggtgaatgggaacataaattg
tctcaaatagagcaaggccatctggaacgtgcagaatttatgcatgaaattgcatgtatt
acacaaacaatcgttaaacgagcgaaggaatatgattcggacacaatcccgggtgattac
gcaacattagaggcaccatgcccaaactgtagcaacaaagtcaaggaaaactaccgacgc
ttcatgtgcatgaaatgcgatttctcgatctcaaagattcctggtggccggcaattagag
atcgaagaagtcgagcggttgctattggaaaaggcgattggcccgctatcgggtttccgc
tcaaaaacaggtcgaccattctcggctattttaaagcttacttgcgatgaagtagtcaac
cactataagttaggatttaacttcgaacaggatacggcgaaagataagcatgaaataccc
aacttttctttgcaggagcctataggacaatgcccaaagtgttatggccgtgtgttctgg
catggtataagctatatttgtgaaaatcaagttactcatccaaaaacctgtgactttcga
gccggaaggataatactacagcaagaaatcacgcaggagcaaatggcaaagttgctcaat
aatgggcgcactgatctactaactaatttcaagtcctcacgcactgggcgtaattttaag
gcattccttattaaacaaaaagacggttcgattggcttcgagttcgagaagaaagagaca
ttgtcaaggcccataaaaaaatctttagcgtatagtaagaacaataagcagtaa
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