Candidatus Vallotia laricis: GKR41_p00011
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Entry
GKR41_p00011 CDS
T07905
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
vla
Candidatus Vallotia laricis
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vla03036
]
GKR41_p00011
03400 DNA repair and recombination proteins [BR:
vla03400
]
GKR41_p00011
Chromosome and associated proteins [BR:
vla03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
GKR41_p00011
DNA repair and recombination proteins [BR:
vla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GKR41_p00011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
DUF7079
Histone_HNS_N
DUF6471
Motif
Other DBs
NCBI-ProteinID:
UDG82659
LinkDB
All DBs
Position
unnamed:complement(19713..19946)
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AA seq
77 aa
AA seq
DB search
MDEQKRQKIIAYIHRQMAEYGISIERLSEALAENIQPILFRDAYGNVWDGKGEMPNWLKR
AVYAGQSAEHFRVKTKP
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacagaagagacagaaaattattgcgtatattcacaggcaaatggcagaatat
ggtatttccattgaacgtttgtctgaagcgctcgctgaaaatatacagccaatcttattt
cgtgatgcgtatggaaacgtatgggatggtaaaggagaaatgcctaattggcttaagcgg
gcggtatatgcggggcaatcagctgagcacttcagggtaaaaacaaaaccataa
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