Vagococcus luciliae: G314FT_03230
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Entry
G314FT_03230 CDS
T09015
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vlc
Vagococcus luciliae
Brite
KEGG Orthology (KO) [BR:
vlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlc03400
]
G314FT_03230 (sbcC)
DNA repair and recombination proteins [BR:
vlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G314FT_03230 (sbcC)
Archaeal homologous recombinant proteins
G314FT_03230 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UUV98231
LinkDB
All DBs
Position
complement(298534..301665)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKPLTLILEHFGPYENETIDFSSFYAQSLFLISGKTGSGKTTLFDAMSYALYGSTSGESR
EAKEMRSNFSTIDDTTRVTFIFEHDKKTYHIMREPEQLRRRLRGDGEKLEKAKSVLTIYN
EEGKEEAQYTKQMDVNMRIQDLLQLSAKQFSQIVMLPQGDFQRFLQSDSDNKEAVLRQLF
DTTMYQDIARSLKDKKKEQSNQLKKEQQKLSTLFEQINWDEAYIEKSTDELTIDEKLDLY
GEQKESKERHIARLDETVNTTKKQRDNQLSVLEKARTLTQCFEEKEETTKKIEVKLLEAD
NIHLLKEKMNDFIQVEPLEKIVDEILKVQQTIQTLKEEQEQVRHLLEDVTQQLVELTTQK
QALEKQQPVMKEYEKRLVKLEELVPLFEEEKNIKATLTTLQKTKETQSNKKEVLEQSLNA
KQRQYTQLQESIASIPTRYKEQAELKERLSREEKLLSKIEDYQLLEQQKATLSSELLVLN
HTQKQLDAELSQIKLTLSDKKDQWARGQIARLSLDLKEGLPCPVCGAIEHPTPAHVTQLS
KEEFNELEELIAHLEQRQEEAVQQLSNINAQITSSQEKLSNDEKELNEMRKTISAEFMDK
ESSSWLDDITQQVGKTQEQLDRLKEQLVNLEQQEQEIMTIKESSKEIEKQLATVTKEWQQ
TQEEKRLQQHSYEQLKKRLGEEFSSLEDVTAEQKKLQHQLEDWVQSSRQCEKAISDATNE
HTKTQTRLEEIEKNNQIQEKELDTLKSTKIELLSNYQWDEDKLQAVLTDKTHKASYEKTI
NQYEKEVFSLRESLVALEEKTKETEKPNVLDMEESYQEISQTYDELVDKKRQEEIQLENN
NKTIATIQRLMKNIKEEMQSLHELSVLSDVLNGDSDHKLSIERYVLQSYLRKILNVANHT
LKRLTRGRYTFALRDAKQSSKKKTGLEIDIFDDNVGRLRGVNTLSGGESFIASLTLALAL
AEVIQSESGGVKIDAMFIDEGFGSLDEEALETAIRALETMGGSDRLIGIISHVNELKERI
PQQLKISVSKDNRSHATPQLEFT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttaactttaatacttgaacattttggtccttatgaaaatgaaaccattgat
ttttcttctttttatgcccaatcattgtttcttatttccgggaaaacagggtctggaaaa
acaaccctttttgatgcgatgagttatgctctttatggtagtacatctggagaatcacgc
gaagccaaagagatgcggtcaaatttttcaaccattgatgatacaacacgtgtgacgttt
atttttgaacatgataaaaaaacgtatcacatcatgcgtgaaccagaacaattacgtcgt
cggttacgtggtgatggagaaaaattagaaaaagccaaatctgttttaacgatatacaac
gaagaaggaaaagaagaagcacagtacaccaaacagatggatgtcaacatgcgtattcag
gatttgttacagttgagtgctaaacaattttctcaaatcgtgatgttaccacaaggtgat
tttcaacgattcttacaatcggatagtgacaacaaagaagcagtgttacgccaattgttt
gataccacaatgtatcaagatattgccagaagcttaaaagacaagaaaaaagaacaatcc
aatcaactaaaaaaggaacaacaaaagctttcaaccttatttgagcaaatcaattgggat
gaagcatatatagaaaaatcaacagatgagttaacaattgatgaaaaattagacttgtat
ggggaacaaaaagagagcaaagagcgtcacattgctcgtttagatgaaacagttaataca
acaaaaaaacaacgagacaatcagttatctgtattagaaaaagcacggacacttacacaa
tgctttgaggaaaaagaagaaacaacaaaaaaaatcgaagtaaaattacttgaagcagat
aacattcatctgctaaaagaaaaaatgaatgattttattcaagtagaacctcttgaaaaa
atagtagatgagatattgaaagtccaacaaactatccaaacactaaaagaagaacaagag
caagtcaggcatttattagaagacgtgacacaacagctagttgagttaacgactcaaaaa
caagcactagaaaaacaacagcctgtgatgaaagaatacgaaaagcgattagtcaaatta
gaagaactcgtgccactttttgaagaagaaaaaaatattaaagcaactcttacaacactt
caaaagacaaaagaaacacagtcaaataaaaaagaggtattagaacagagtcttaatgct
aaacaacgtcaatacacgcaattgcaagaatcaatagcaagtattccaactcgttataaa
gagcaagcagagttaaaagaaagattgtctagggaagaaaagttgttatctaagattgag
gactatcaactacttgaacaacaaaaagcaactctttcaagtgagttactcgtgttaaat
catacacaaaaacagttggatgcagaactatcccaaattaaactcacgttatctgataaa
aaagatcagtgggcacgaggacaaattgcccgtttaagtttggatttaaaagaagggtta
ccgtgtccggtgtgtggtgcaatagaacatcctacacctgctcatgtgacacaactgtcg
aaagaagaatttaatgaattagaagagttaatcgctcatttagaacagcgacaagaagaa
gctgttcaacaattgagcaatatcaatgcccaaataactagttcgcaagaaaaactgtca
aatgatgagaaagagttaaacgagatgaggaaaaccatatcggctgaattcatggataaa
gaatcatccagttggcttgatgacatcacacaacaagttgggaaaacacaagagcagtta
gatagattaaaagaacaacttgtaaatttggagcaacaagaacaagagataatgactata
aaagaatcatcaaaagagatagaaaaacaactcgctaccgtcacaaaagaatggcaacaa
acacaagaagaaaaacgtctgcaacaacatagctacgaacaattaaagaaacgtttagga
gaagagttttcttccttagaagacgtgacggcggagcaaaaaaaattacagcatcagtta
gaagattgggtacaatcttctcgtcagtgcgaaaaagctatttctgatgcgacgaatgag
catactaaaactcaaacaaggttagaagaaattgaaaaaaataatcaaattcaagaaaaa
gaactagatacattgaagtcaacaaaaatagagcttctatccaactatcaatgggatgaa
gataagttgcaggctgttttgacagacaaaacacataaagcaagttacgaaaaaacaatc
aatcaatatgagaaagaagtcttttcactaagagaatccttagtagcgttagaagaaaaa
acaaaagagacagaaaaacctaatgttttagatatggaagaaagctatcaagaaatttct
caaacatatgacgaactagtggataaaaaacgtcaagaggaaatacaacttgaaaacaat
aataaaacaatcgctacaattcaacgattaatgaaaaatattaaagaagagatgcaatct
ttacatgagttgagcgtattatctgatgtattaaatggtgatagtgaccataaattaagt
attgaacgatatgtgttacaaagttacttacgcaaaattttaaacgtggcaaatcataca
ctgaaacgcttgactcgaggtcgttatacatttgccttaagagatgccaaacaatcttct
aagaaaaaaacagggttagaaattgatatctttgatgataatgtcggtcgcttaagagga
gtaaatactttatcaggaggcgaaagttttattgcttccttaactttggcattagcatta
gctgaagtgattcaaagcgaatcaggaggcgttaaaatagatgcaatgtttattgatgaa
ggatttggttcgttggatgaagaagcgttagaaacagccatcagagcattagaaaccatg
ggtggaagtgatagattaatcggcatcatctcgcacgttaatgagttaaaagaaagaatt
ccacaacaattaaaaatatcggtgtctaaagacaacagaagtcacgcgacaccacagcta
gaattcacgtaa
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