Vagococcus luciliae: G314FT_11450
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Entry
G314FT_11450 CDS
T09015
Symbol
helD
Name
(GenBank) DNA helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vlc
Vagococcus luciliae
Pathway
vlc03420
Nucleotide excision repair
vlc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G314FT_11450 (helD)
03430 Mismatch repair
G314FT_11450 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlc03400
]
G314FT_11450 (helD)
Enzymes [BR:
vlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G314FT_11450 (helD)
DNA repair and recombination proteins [BR:
vlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G314FT_11450 (helD)
MMR (mismatch excision repair)
Other MMR factors
G314FT_11450 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C_2
UvrD_C
DEAD
AAA_30
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
UUV98987
LinkDB
All DBs
Position
1161098..1163251
Genome browser
AA seq
717 aa
AA seq
DB search
MSEQKRQEEKYLKMTYQQLLHTQKTLSEWLEETKHSGQSMMSKITEDIKLNVDGISDKLD
SFSQIEMKNREIDQYNIKIRNGEITLDKVERLLEKPYFGKIKVDFLDEEEPESFYIGMHG
FSDENNDNLIYDWRSPIAELFYNNELGSSSYQVRGNTIETSIEERRQFVIEKDKLLTYFD
TMVSIQDDVLLSALAKDDTQKMQDITATIQKEQNVIIRDTSTPYMLVNGVAGSGKTSAIM
QRIAYLLYNMQDEITSDDVLILSPNKAFIQYVSDVLPSLGEKNPRNMTLLQFAQNYMGRQ
IESEETYFKRISKESVSKETTYLRDDQFIHYIKNNVYHEFKKDRLFKDIMYRDKDIISKE
QIRQLFDETPQNSPHVDRIQGVKQRLLSGWNQRLIQQSRTKKIHDQVISLTEDQQEKYFG
HLIQDDSEKSLTRYAEQLLRKKYKKVTQQINRYRWLNQEVLFHELFEGFSGSIYKRQMSP
ITLDEAIVLLTIKHFYVERLTMPNMRFVLVDEVQDYTPAQLQFLLLLFPKSDFTMVGDEN
QAIFNTSTPFKQIKTLFSVDDKEVTTYQLLTSYRSTGAITKAFNELSLSKNATIVPIRPQ
GVAPQLIKYNQPSEIKEVVANVLSQLDGEKLTVLVKTEHEKEIIETFFDEETQVHVTSIN
LAKGLEFDNVLLLNASAAHFTTIRDQKILYTAFSRAMNHLFIGYEKSLTPLLAYLEK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaaaaaagacaagaagaaaaatatttaaaaatgacctatcaacaattactg
catactcaaaaaacattaagtgaatggttagaagagacaaagcattctggtcagagtatg
atgagtaaaattacggaagatattaagctaaatgttgatggtatatcggataaattagat
agtttttctcaaattgaaatgaaaaatcgcgaaattgatcaatataatataaaaataaga
aatggagaaataactttagataaagttgaacgtttgttagaaaaaccttactttgggaag
ataaaagttgattttttagatgaagaagaaccagagtcattttatataggcatgcatggc
ttttctgatgaaaataatgataatttgatttatgattggcgttctcctattgcagaattg
ttttataataatgagttaggttcatcatcttatcaagtaagaggaaatacgattgaaaca
tctattgaagaaagacgtcagtttgtgatagaaaaagataaattgttaacgtattttgat
acgatggtttctattcaagatgatgtattgttaagtgctttagctaaagatgatacacaa
aaaatgcaagatatcactgctactattcaaaaagaacaaaatgtgattattcgtgacaca
agtacgccttatatgttagttaatggagtagctggtagtgggaaaacatcagctatcatg
caacggatcgcgtacttactatataatatgcaagatgaaattacctctgatgatgtgttg
atactgtctccaaacaaagcatttatacaatatgtatcagatgttttgccatcattaggt
gaaaaaaatccaagaaatatgacattactacaatttgctcaaaattatatggggagacaa
atcgaatcagaagaaacgtattttaaacgtatctcaaaagaatcggtttcaaaagaaaca
acctatttaagagatgatcaatttatccattatataaagaataatgtgtaccatgaattt
aagaaagatcgcttattcaaagatattatgtatcgagataaggatattatttcaaaggaa
cagattagacaattgtttgatgaaacaccacaaaatagtccacatgtagatagaatacaa
ggagtaaagcagaggttattgagtggatggaatcagcgactcattcaacaatctcgtact
aaaaaaattcatgatcaagttatttcgttgacagaagatcaacaagaaaaatattttggt
cacctgattcaagacgattcagaaaaaagtttaacacgttatgcagaacaattgttacga
aaaaaatataaaaaagtgacacagcaaattaatcgctatcgttggttaaatcaagaggtc
ttatttcatgaattatttgaaggattttcagggagtatatataaaagacaaatgtcacca
attacattggatgaggctattgtattattaactattaagcacttttatgtggaaagatta
actatgccaaatatgcgatttgttttggtagacgaggtgcaagattatacaccagcgcaa
ctccagtttttattattgctttttccaaaaagcgacttcaccatggtaggagacgaaaac
caagctatttttaacactagtacaccttttaaacaaattaagacacttttttcagttgat
gataaagaggtaacaacctatcaattgttaacgagttaccgttctacaggagcgattact
aaagcgtttaatgaattgtcactatcaaaaaatgcgacgattgtcccaattcgtccacaa
ggagttgcaccgcaattaatcaaatataatcaaccatcagagattaaagaagtagtggct
aacgtattgagtcagttagatggtgaaaaattgacggtattagtgaaaacagagcatgaa
aaagagatcatagaaacattctttgatgaagaaacacaggttcatgtcactagtattaat
ctagcgaaagggctagaatttgataatgtattattattaaatgcttcggcggctcatttt
accactattcgagatcaaaaaatattatatactgctttctctcgcgcgatgaatcattta
tttattggctatgaaaaatcattaacacctttattggcttatttagaaaaataa
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