Vagococcus luciliae: G314FT_13030
Help
Entry
G314FT_13030 CDS
T09015
Symbol
rpoN1
Name
(GenBank) RNA polymerase sigma-54 factor 1
KO
K03092
RNA polymerase sigma-54 factor
Organism
vlc
Vagococcus luciliae
Pathway
vlc02020
Two-component system
vlc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vlc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G314FT_13030 (rpoN1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G314FT_13030 (rpoN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlc03021
]
G314FT_13030 (rpoN1)
Transcription machinery [BR:
vlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G314FT_13030 (rpoN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
Arg_repressor
TBPIP
CEP209_CC5
Motif
Other DBs
NCBI-ProteinID:
UUV99143
LinkDB
All DBs
Position
1334070..1335413
Genome browser
AA seq
447 aa
AA seq
DB search
MKMSQNFRQGQSQVQTQKLAMTQQLQQSIKILQYGTEDLLSFLNDKMLENPLIDVSVSDM
DTQYLEPKNYDASKSDGKTDWINQIPETTQSLFHYLIEQIHLNYRDTALRSLSLFLVEFI
DTNGYLTISIEEAMKLKQATYIEVLDALTLIQMLEPAGVGARNLQECLMLQIERDDNAPN
QAYLVLEEYFDELANRKWQKIEKKLGILLVEIQEIFDYIQKLHPNPGSLFYSDEDSIIYP
DLEVKVDRTDNSISIVSTKVGKPVISFQTTYFEKMSHQGGEEVKRYLNDKKSEFEWLKKT
LEQRGNTILRVGEEIVKKQSAFFIESNHPLTPMKLKSVAEELSLHESTISRAVNGKYLTT
DFGVFELRSFFSTGLEQKNSNEVIGVNDVKQLIETIIREENKTKPLSDQKIVDLLKEKNI
QISRRTVAKYREELGIQSSSMRKRFDN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcgcaaaattttagacagggtcaaagccaagttcagactcaaaaattagcc
atgacccaacaattacaacaatccattaagatactacagtatggtacagaagacttactt
tcttttttaaatgataaaatgttagaaaatccgttgattgatgtatccgtttccgatatg
gatactcaatacttagaacctaaaaattatgatgcgtcaaaaagtgatggaaaaacggat
tggataaatcagattccagaaacgactcaatcattgtttcattatttgattgaacaaatc
catttgaattatcgggatacagcgttgagaagtcttagtttatttcttgttgagtttatt
gatacaaatgggtacttaacaatttcaatagaagaagcgatgaaattaaagcaagcgact
tatatagaagtgctagatgcattaacacttattcagatgcttgaacctgctggtgttggt
gctagaaatctacaagagtgtcttatgttacaaatagaaagagatgataacgctcctaac
caagcttacttagtattggaagaatattttgacgaattggccaatagaaaatggcaaaag
attgaaaaaaagttagggattttattagtggagattcaagaaatttttgactatattcaa
aaattacacccaaatccaggatcactgttttattcggacgaagatagtatcatttaccca
gatttagaagtcaaagtagatagaacagataattcaatttctattgtatctactaaagta
ggaaagccggtaattagctttcaaacaacgtattttgaaaaaatgtctcatcaaggtgga
gaagaagtcaaaagatatttaaatgataaaaaaagtgaatttgaatggcttaaaaaaacc
ttagagcagcgaggaaatacgattttacgagtaggagaagaaattgttaaaaaacaatca
gcgttctttatagaatccaatcacccacttactcccatgaagttgaaaagtgtggcagaa
gaactatcacttcatgaatcaactattagtcgagctgttaatggaaaatatttaacaaca
gattttggtgtatttgagctaagaagtttcttttcaacaggattggaacaaaaaaattca
aacgaagtgattggagtaaatgatgttaaacaattgattgaaacaattatcagagaagaa
aacaagaccaaaccactatctgatcaaaaaattgtcgatttattaaaagaaaaaaatatt
caaatttctcgaagaacagtcgctaaataccgtgaggaattaggaattcagtcatcttct
atgagaaaaagatttgataattaa
DBGET
integrated database retrieval system
