Vibrio lentus: ISX51_00250
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Entry
ISX51_00250 CDS
T09020
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vle
Vibrio lentus
Pathway
vle03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ISX51_00250 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vle03019
]
ISX51_00250 (orn)
03009 Ribosome biogenesis [BR:
vle03009
]
ISX51_00250 (orn)
Messenger RNA biogenesis [BR:
vle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ISX51_00250 (orn)
Ribosome biogenesis [BR:
vle03009
]
Eukaryotic type
Pre-60S particles
RNases
ISX51_00250 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WGS60746
LinkDB
All DBs
Position
ED252-c1:complement(42066..42611)
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AA seq
181 aa
AA seq
DB search
MSFSDQNLIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAIHQPQSELDKMDE
WCTTTHTGSGLVKRIQESTVSEQDAIKQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHM
PELEEYFHYRYVDVSTLKELARRWKPEVLDGFSKSGSHLALDDIRESIAELQYYRKTIIS
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttagcgatcagaaccttatttgggttgatctagagatgacaggacttgatcct
gaaactcataaaattattgaaattgcttctatcgttacagatagtgagctcaacattttg
gctgaagggcctgttttggccattcaccaacctcagagtgaactggataagatggatgag
tggtgtacgacgactcatactggcagcggtttagtaaagagaattcaagaaagcaccgtt
tcagagcaagatgcaatcaaacaaacgattgagtttcttgaaaagtgggtaccgaaaggt
aaatcgcctatttgtggtaacagcattggccaagatcgccgtttcctatacaagcacatg
ccagagttggaagagtacttccactaccgctatgtcgacgtaagcactttgaaagagctt
gcgcgtcgttggaaacctgaagtactcgatggtttttctaaatcaggaagccaccttgca
ctagacgatattcgagagtcgattgcagagcttcagtactaccgaaaaacaatcattagc
atttaa
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integrated database retrieval system
