Vibrio lentus: ISX51_00685
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Entry
ISX51_00685 CDS
T09020
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vle
Vibrio lentus
Pathway
vle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ISX51_00685 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_00685 (mutM)
Enzymes [BR:
vle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ISX51_00685 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ISX51_00685 (mutM)
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ISX51_00685 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_IS1595
DNA_ligase_ZBD
DUF7575
HscB_4_cys
YhfH
Motif
Other DBs
NCBI-ProteinID:
WGS60829
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All DBs
Position
ED252-c1:complement(138602..139411)
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AA seq
269 aa
AA seq
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MPELPEVEVSRMGISPHLVGEKIKTLTFRTPKLRWDIPQELKRLEGQVIRSISRRAKYLL
IETDTGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLTNGKILRYNDPRRFGAWLWSAPD
KIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGVGNIYANEALFSSR
IHPLRPASKVIKEEWVLLTKEIKQVLATAIKQGGTTLKDFAQADGKPGYFAQELQVYGKS
GEKCPSCGEKLEEQKIGQRNTFFCSQCQV
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaagtaagccgcatggggatctcgcctcatttagtcggt
gagaagattaaaactctgacttttcgtacacctaaactgcgttgggatatccctcaagaa
cttaagcgattagaagggcaggtgattcgctctatttcacgccgagcgaagtacctattg
atagaaaccgataccggaacagccattgttcaccttgggatgtctggctcactgcgcgtg
ttagacgcagatttcccgccagcaaaacacgatcacgtggatcttaagttaaccaatggc
aagatattgcgttacaacgatccgcgtcgctttggtgcgtggttatggtcggcgcctgat
aagatacatactgtattactgggttctggtcctgagccactgactgacgacttcaacgca
gattacattgctgagaaagcagaaaagcgtaaagttgccgtcaaacagttcattatggac
aacaaagtagtggtaggtgtgggtaacatctacgccaatgaagcgctgttttcttcacga
attcatccacttcgcccagcaagcaaagtgataaaagaagagtgggtcttgttaaccaaa
gagatcaaacaagtactcgctaccgccatcaaacaaggcggcaccacactcaaagacttc
gcccaagcggatggtaagcccggatacttcgctcaagaactgcaagtctatggtaagtcg
ggagaaaagtgcccgagttgtggtgagaaacttgaagagcaaaaaatcggacagaggaat
acgtttttttgctctcaatgtcaggtatag
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