Vibrio lentus: ISX51_01030
Help
Entry
ISX51_01030 CDS
T09020
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vle
Vibrio lentus
Pathway
vle03030
DNA replication
vle03410
Base excision repair
vle03420
Nucleotide excision repair
vle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISX51_01030 (polA)
03410 Base excision repair
ISX51_01030 (polA)
03420 Nucleotide excision repair
ISX51_01030 (polA)
03440 Homologous recombination
ISX51_01030 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vle03032
]
ISX51_01030 (polA)
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_01030 (polA)
Enzymes [BR:
vle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISX51_01030 (polA)
DNA replication proteins [BR:
vle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ISX51_01030 (polA)
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ISX51_01030 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ISX51_01030 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
WGS60894
LinkDB
All DBs
Position
ED252-c1:complement(210993..213806)
Genome browser
AA seq
937 aa
AA seq
DB search
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFTSDRIAV
IFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIPGVEADDVIGT
LASQASAMGMPVLISTGDKDMAQLVDENVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGSIEKLYQNLDDIAALGFRGSKTMAKKLADNK
ANADMSYELATIKLDVELEDTPESLVKAQPNTDELIKLYGQLVFKSWLNELLEGGSGVVE
ADEKSAAAGAGSVRSSAASTTSTVEMNTSAVTIDRSNYETILDEASFNVWLEKLKAADVF
AFDTETDSLDYMVANLVGLSFATEEGVAAYVPVAHDYLDAPQQLDRDWVLEQLKPILEDD
AQAKVGQNLKYDMSVLARYGIEMKGIKFDTMLASYVFNSVGGKHDMDSLALRFLQHSCIS
FEQIAGKGKKQLTFNQIELGEASPYAAEDADVTLRLHNRLMENIEKDEKLKSIYEEIEVP
LIPVMSRIERTGVFIDDMLLGAQSQEIAVRLDELEQKAYEIAEQEFNMNSPKQLQAILFE
KMGLPVIKKTPSGAASTNEEVLQELALDYPLPKLIIEYRGLAKLKSTYTDKLPKMINAET
GRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAQHGWKILAVDYSQIELR
IMAHLSGDKALLEAFQQGKDIHAATAAEIIGVDIESVTTEQRRRAKAVNFGLIYGMSAFG
LAKQLGIPRGEAQHYMDTYFERYPGVMQYMEDTRSAASEQGFVETIYGRRLHLPEIQSRN
GMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIQAEGDGRVKLLMQVHDELVFEVQES
ALAEIESKVQELMESAADLEVPLVAEAGHGDNWDQAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtattcctgataatccattgattttgatcgatggctcttcttacctatatcgc
gcgttccatgcttaccctggcaccatgagtaatggtgatatcccaaccaatgctgtttac
ggcgtggttaacatgctgcgcagcatgatgcgtcaatttacttctgatcgtattgcggtt
atttttgatgcgaaagggaaaacgttccgtgatgatatgtacccagagtacaaagcaaac
cgtccaccgatgcctgatgatcttcgttgtcagatcgagccgctgcacaacgtaattcgt
gcaatgggtctaccgcttatctctatccctggggtagaagctgatgacgtgattggtacg
ctggcttctcaagcttccgcgatgggtatgcctgttcttatcagtactggcgataaagat
atggcccaactggttgatgagaacgttactttgatcaataccatgactaatgtcgtgatg
gatcgtgaaggcgttatcgagaagtttggtatcccacctgagttgatcatcgattacctt
gcactgatgggcgataaagtcgataacatcccaggtgttccgggtgtgggtgataagacc
gctacagcattactgcaaggtattggtagcatcgaaaagctgtaccaaaaccttgatgat
attgcagcgcttggtttccgtggttcgaagacgatggctaagaaactggctgataataaa
gccaatgctgacatgtcttacgaacttgcgacgattaaactcgatgttgaattagaagac
acgccagagtctctcgttaaagcacaaccaaatactgatgagttgattaagctatatggt
caactggtcttcaaatcttggctgaacgagctacttgaaggcggtagcggtgtggttgag
gcggatgagaaatctgccgcagcgggagctggttcggtacgcagcagcgcagcatcaacc
acttctaccgtagaaatgaacacctctgcagtgacgattgatcgcagcaactacgaaacg
attttagatgaagcgtcattcaatgtttggttagagaaactcaaagccgcagacgtgttt
gcctttgataccgagactgacagccttgattacatggtggcgaaccttgtgggtctatca
ttcgcaaccgaagaaggcgttgccgcttatgtgcctgttgcccatgattacttagacgca
cctcagcagctggatcgtgactgggtgcttgaacagctgaaaccgattcttgaagatgac
gcacaagcgaaagtaggtcagaaccttaagtacgatatgagtgtgctagcgcgctacggt
atcgagatgaagggcattaagttcgataccatgttggcgtcatacgttttcaatagcgta
ggtggtaagcatgacatggacagcctagcgctgcgtttcctacaacatagctgtatctca
tttgagcaaattgcaggtaaaggtaagaagcaactgactttcaaccagattgagctgggt
gaggcttctccatatgctgcggaagatgctgacgtgactttacgtcttcataaccgcctg
atggaaaacatcgagaaagatgaaaagttaaaatcgatctatgaagagatcgaagtaccg
ctaattcctgtgatgtctcgtattgagcgcaccggtgtattcatcgacgacatgttgttg
ggcgctcaatcgcaagagattgcggttcgtcttgatgagctagaacagaaagcttacgag
attgcagagcaagagttcaacatgaactcgccaaaacagctgcaagcgatcttgttcgaa
aagatgggtctgcctgttattaagaaaacgccttctggtgccgcttcgactaacgaagaa
gtgctgcaagagttagcgttggactacccattgcctaagctgatcattgagtatcgtggc
ttggcgaaactgaagtcaacgtacaccgataaactgccgaagatgatcaatgcggaaacg
ggtcgtgttcatacgtcttaccatcaagccgtgaccgcgacaggccgtttgtcttcgacc
gatccaaacctacagaacatcccaattcgtaatgaagaaggtcgtcgtatccgccaagca
ttcgttgcacaacatggttggaagatcctagcggtcgattactctcaaattgaattgcgt
atcatggcgcacctatcgggtgataaagcgttactggaagcattccaacaaggcaaagat
atccacgcggcaaccgctgctgagatcattggcgttgatattgagagtgtgaccactgaa
caacgtcgtcgtgctaaggctgttaactttggtcttatctacggcatgagtgcctttggt
ttggctaagcaactgggtattcctcgtggtgaagcacagcactacatggacacttacttc
gaacgctacccaggcgtaatgcaatacatggaagacactcgcagcgctgcttcagagcaa
ggcttcgttgaaaccatttacggtcgtcgtttgcaccttcctgaaatccaatctcgtaat
ggcatgcgtcgtaaagcggctgagcgtgcggcgatcaatgcgccaatgcaaggtacagcg
gcagacatcatcaagaaagcgatgttgttagtggatgagtggattcaagccgaaggcgat
ggtcgcgtgaagctattgatgcaagtacacgatgaattggtatttgaagttcaagagtca
gctttagccgaaattgaaagtaaagtacaagaattgatggagtcagcagcagatctcgaa
gtaccgttagtcgcggaagcaggccatggtgacaactgggatcaagcccactaa
DBGET
integrated database retrieval system
