Vibrio lentus: ISX51_01620
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Entry
ISX51_01620 CDS
T09020
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vle
Vibrio lentus
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vle03009
]
ISX51_01620 (rsmB)
Enzymes [BR:
vle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ISX51_01620 (rsmB)
Ribosome biogenesis [BR:
vle03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ISX51_01620 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltransf_37
Methyltransf_5
Methyltransf_31
MTS
Methyltransf_15
Bul1_C
TRM5-TYW2_MTfase
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WGS60995
LinkDB
All DBs
Position
ED252-c1:complement(340065..341345)
Genome browser
AA seq
426 aa
AA seq
DB search
MNVRAAAANVLFQVVDKGHSLSHALPAAQKTIRPRDHALLQEICYGALRYLPRLESIANE
LMENSLKGKKRVFHHLILVGIYQLSFMRIPSHAAVAETVEATKTLRGPSLSGLINAVLRS
YLRDQEELDEKAVSHNAGKYSHPSWILKMLQESYPDQWEQLVEANNSKAPMWLRVNRQHH
TRDEYVELLKNENIEYTLHPEAADAIKLASPCDVTLLPGFDRGWVSVQDAAAQLSVDYLT
PKDGELILDCCAAPGGKTAHILEHTQDTEVVAIDSDIKRLDRVYDNLERLQLRADVICGD
ARYPEEWWTGSQFDRILLDAPCSATGVIRRHPDIKWLRRASDIDALAELQSEILDAMWRQ
LKEGGTMVYATCSITPQENVLQVKAFLERTENATLVGSDIEKPGRQILPGEEDMDGFYYA
VLVKQA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgctgctgctgcaaatgtcctattccaagttgtcgataaaggccactct
ctttcacacgctctccctgcggctcaaaaaacgatccgtccgcgagaccatgctctactg
caagagatttgctacggcgcacttcgttacctgcctcgcttagagtcaatcgctaacgaa
ctgatggaaaactcgcttaaaggtaaaaagcgcgtattccaccacctgatcttagtaggc
atttaccagttgagctttatgcgcattccttctcatgctgccgttgctgaaacagttgaa
gcaaccaaaacactgcgcggcccaagcctcagtggcttgatcaacgcagtgcttcgcagc
tacctgcgcgatcaagaagagctagatgagaaagccgttagccacaatgcgggtaaatac
agccatccaagctggattctaaaaatgcttcaagaaagctacccagatcagtgggagcaa
ttggttgaagcaaacaacagcaaggcaccaatgtggctgcgcgtaaaccgccaacaccac
actcgtgacgagtatgttgaactgcttaaaaacgaaaacattgaatacacactgcaccct
gaagcggctgatgccataaaattagcgtcaccttgtgatgttactttgcttcctggtttc
gaccgaggctgggtatcagtacaagatgctgccgctcaactttctgttgattacctaaca
ccaaaagatggtgaactaatcctagactgctgcgcagcacctggcggtaaaactgcacac
attcttgaacatactcaagacactgaagtggttgcaatcgacagtgatattaaacgccta
gaccgtgtttacgataaccttgaacgcctacaactacgtgccgacgtaatctgtggggat
gctcgctaccctgaagagtggtggacgggcagtcagttcgatcgcatcctacttgatgct
ccgtgttcagcgaccggtgtaatccgccgtcaccctgacattaagtggctacgccgtgcc
tctgatattgatgcactagcagagctgcaaagtgagattttggatgcaatgtggcgccag
ctaaaagaaggcggcaccatggtttatgcgacatgttctatcacgccgcaagaaaatgtg
ctgcaagtgaaagcattcttagagcgtaccgagaacgcaacgctggttgggtctgatatc
gaaaaaccgggtcgtcaaatactacctggtgaagaagatatggatggcttctactacgca
gttctagtaaaacaggcataa
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