Vibrio lentus: ISX51_01840
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Entry
ISX51_01840 CDS
T09020
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vle
Vibrio lentus
Pathway
vle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISX51_01840 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vle03019
]
ISX51_01840 (recQ)
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_01840 (recQ)
Enzymes [BR:
vle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ISX51_01840 (recQ)
Messenger RNA biogenesis [BR:
vle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ISX51_01840 (recQ)
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ISX51_01840 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WGS61029
LinkDB
All DBs
Position
ED252-c1:382152..383990
Genome browser
AA seq
612 aa
AA seq
DB search
MTATLIAEQTPTPANDAQDILQDVFGYQSFRDGQQEVIDLAVEGKDSLVIMPTGGGKSLC
YQIPALVRDGLTLVISPLISLMKDQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSGQL
KMVYASPERVLMRDFIERLQGLPLSMIAVDEAHCISQWGHDFRPEYALLGQLKQYFPHVP
YMALTATADDATRKDIISRLQLVEPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKG
NCGIIYCGSRKKVEMVTEKLCNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDEKE
EGPQKQVEMHKLNAMSAFAEAQTCRRQVLLNYFGEYREKQCGNCDICLDPPKHFDATQEA
QKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRDHSHDYWISIFRQL
IHKGLLFQNITRNSTLQLTEEARPLLRGEMSLELAVPRLDTAVRNAKSDKLSSKNYDKKL
FAKLRKLRKSIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLDKYADPF
LDLIQEHITTHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccactctgattgctgagcaaacaccaactcccgcgaatgatgcgcaagatatc
ttacaagatgtctttggttatcaaagctttcgtgatggtcagcaagaggtcatagaccta
gccgttgaaggcaaagacagcttggtgattatgccaaccggtggtggtaagtctctgtgt
taccagatcccggcgttagtgcgtgatgggctgactttggttatctcaccgctcatttca
ttaatgaaagaccaagttgaccaattgaaagccaatggtgtggcggctgagtgcataaac
tcatcgatgccacgcgatcaactgttgagcgtgttcaaccgcatgaactcaggccaattg
aagatggtttatgcttcaccagagcgtgtgttgatgcgtgacttcatcgagcgcttacaa
ggtttgccgctttcgatgattgcggtggatgaggcacactgtatctctcagtggggacac
gatttccgccctgagtatgctttgctaggccagcttaaacagtatttcccgcatgtgcct
tatatggcgctgacggcaaccgctgacgatgcgacgcgcaaagatattatctcgcgtttg
cagctggtggagccgcacacttacttaggtagcttcgatcgccctaatattcgctacaac
ctagttgagaagcacaagcccgtgtcacaggtggttcgctacctagaaacacagaagggc
aattgcggcatcatctattgtggtagccgtaagaaagtggaaatggtgaccgagaagctg
tgcaataacggtattcgcgctgcgggttatcatgcaggcatggacaccgacgaacgcgct
tacgttcaagaagctttccaacgtgatgatattcagattgtggttgcgaccgtggccttc
ggtatgggcatcaataaacccaacgtacgctttgtggtgcactttgatatcccacgcaac
atcgaatcttactatcaagagacaggccgtgcaggtcgtgatggcttgcctgctgaagcg
atgatgttgtttgatcctgctgatatgggttggctgcgtcgtatgctggatgagaaagaa
gaaggcccgcaaaaacaagttgagatgcacaagctgaacgcgatgagtgcctttgccgaa
gcgcaaacgtgtcgtcgtcaggtgctgctcaactactttggcgaatatcgcgagaagcaa
tgtggtaactgcgatatctgcttagatccaccaaaacactttgatgcgacccaagaggcg
cagaaagcgttgtcttgtgtgtaccgtgttaatcagtcgtttggtatgggctatgtggtg
gaagtgatgcgcggtatgcagaacatccgtgtccgcgataatggtcacgataaactttct
acctacggtattggccgtgaccatagccacgattactggatcagtatcttccgtcagcta
attcacaaaggcttgttgttccaaaacatcactcgtaactcaacattacagttaacagaa
gaagcccgcccgttactgcgtggtgagatgtctttggagctggctgtgcctcgtttagat
accgcagtgcgtaatgctaagtccgataagttaagcagcaagaactacgataagaagttg
tttgccaaactgcgtaagctgcgtaagtcgatcgctgatgaagatggtttgccaccatac
gtggtattcagtgatgcgacgctgattgatatggccgaaatcctacccacatcttatggc
gagatgctggcggtaaatggcgttggtcaacgtaaacttgataagtacgcagacccattc
ttagatttgattcaagaacacatcaccacacacggctag
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