Vibrio lentus: ISX51_01865
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Entry
ISX51_01865 CDS
T09020
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
vle
Vibrio lentus
Pathway
vle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISX51_01865 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vle03019
]
ISX51_01865 (rhlB)
Enzymes [BR:
vle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ISX51_01865 (rhlB)
Messenger RNA biogenesis [BR:
vle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ISX51_01865 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
WGS61034
LinkDB
All DBs
Position
ED252-c1:complement(387780..389090)
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AA seq
436 aa
AA seq
DB search
MKKTHITEQKFADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKT
LAFLTATFNHLLKTPEHEGRKPNQPRAIIMAPTRELAIQIYNDADSLVESTGIKAALAYG
GESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQAVVLDEADRMFDLGFIKDIR
FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEPERKTGHRIQEELFYPSN
EHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILE
QFTKGDVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFA
CEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLRTRNPQQRRSNNNGPRNGNRK
PNQNRRPRQPRHNKEA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacgcatatcacagagcaaaagttcgccgacttggatttactcccgcaagtc
attgaaggattggagaaaaaagggttcgattactgtacccctatccaagccttggcgctc
ccggtactgctcaccggccaagacatcgcaggccaggcccaaacgggtactggtaaaacg
ctagcgtttcttactgctacattcaaccacctgctaaaaacacctgagcatgaaggccgc
aagcctaatcagccacgtgcgattattatggcaccaacgcgtgaactcgcgattcagatc
tacaacgatgctgactctctggttgaaagcacgggtatcaaagcagcattagcttacggt
ggcgagagctacgacaagcaactaggtaagatcgaagaaggcgcagatatcttaattggt
acgactggccgcatcatcgatttctacaaacaaaaggtatttaaccttaaccacattcaa
gctgttgttcttgacgaagctgatcgcatgttcgatcttggtttcattaaagacatccgc
ttcttgttccgtcgtatgccagaacctaaagatcgcctgaacatgctgttctctgcgacg
ctgtcttaccgcgtacaagaacttgcattcgaacacatgcacaacccagagcatgtcgtt
gttgaacctgagcgtaagactggtcaccgtattcaagaagagcttttctacccttctaac
gaacacaaaatggctcttctacaaacgttaatcgaagaagagtggccagatcgcgcaatc
atcttcgctaacactaagcacaaatgtgaatcagtttggggccacttggctgccgatggt
caccgtgttggtttgctaacgggtgatgttcctcagaagaaacgtgaaaagattcttgag
caattcactaaaggtgatgttgacctgcttgtcgcaacggatgttgcagcacgtggccta
cacatccctcaagtaacacacgtattcaactttgacctacctgacgattgtgaagattac
gttcaccgtatcggccgtacaggtcgtgctggtgaaagcggtcactcgatcagctttgct
tgtgaagattacgcaatcaacttgccaccaatcgaagaatacattgagcacgctatccca
atgtctgactacgatgcttctgcactactagaagatctgccagcaccgatgcgcttacgt
acacgtaacccgcaacaacgtcgctcaaacaacaatggtccacgcaacggtaaccgtaaa
ccaaaccagaaccgtcgcccacgccaaccgcgtcataacaaggaagcttag
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