Vibrio lentus: ISX51_02935
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Entry
ISX51_02935 CDS
T09020
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vle
Vibrio lentus
Pathway
vle03030
DNA replication
vle03430
Mismatch repair
vle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISX51_02935
03430 Mismatch repair
ISX51_02935
03440 Homologous recombination
ISX51_02935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vle03032
]
ISX51_02935
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_02935
Enzymes [BR:
vle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISX51_02935
DNA replication proteins [BR:
vle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ISX51_02935
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ISX51_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WGS61242
LinkDB
All DBs
Position
ED252-c1:598521..599153
Genome browser
AA seq
210 aa
AA seq
DB search
MNRLIRYYWHHKLKGSAYQPLFAAPANHEYVSLDCETTSLDPNQAELVTIAATKIIGNRI
ITSQPFEVRLRAPQSLDCNSIKIHRIRHQDLKHGIEEKQALIELLDFIGNRPLVGYHIRY
DKKILDRACLKQLGFPLPNRLVEVSQLYQEKLERQLPNAYFDLSMDAICRQLDLPIPVNK
HDALQDAISAALIFVRLKHGDLPRFNSSYS
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatagattgattcgttattactggcatcacaagctcaagggctctgcttatcagcct
ctgtttgctgcgcctgctaatcacgaatacgtatctcttgattgtgaaaccaccagcctc
gaccccaatcaggcggaattagtcaccattgccgcaaccaagatcattggtaatcgaatc
attaccagccaacctttcgaggtccggctgcgtgcccctcaatcgctcgattgcaattca
atcaaaattcatcgcattcgccatcaagatctcaagcatggtatcgaagagaaacaggct
ttgatcgagctgctcgactttattggtaatcgccctttagttggctatcacatccgctat
gacaagaaaattctcgaccgcgcctgtttaaaacaactcggatttccactgcctaaccgg
ttagtcgaagtgagccagctctatcaagaaaaactcgaaagacagctacccaatgcctat
tttgatctcagtatggatgccatctgtcgccagctggatctgcctatcccggtcaataaa
catgatgcattacaagacgctatctccgccgccctgatctttgttcgccttaaacacggt
gatttacctcgtttcaactcttcttattcttaa
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