Vibrio lentus: ISX51_03200
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Entry
ISX51_03200 CDS
T09020
Name
(GenBank) EAL domain-containing protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vle
Vibrio lentus
Pathway
vle05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ISX51_03200
Enzymes [BR:
vle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ISX51_03200
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Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
DUF1635
Motif
Other DBs
NCBI-ProteinID:
WGS61289
LinkDB
All DBs
Position
ED252-c1:654819..657305
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AA seq
828 aa
AA seq
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MQSTSLLIQDIEQTQRELEKIDFHTHESLLIQVFSSFEKGSVLAACQVIQSTFPNAKIIG
CSANHYISQGVILHQGLYLIVTRFDSTSFSCGVVEYSEQPQIDSQSMWEQLGCTVQTQSI
ICFADRLQINNRALFSAFEQSRYSLPICGGASTITDSGRWVMLNGHCYENAYVMLALHSS
ELVVTKGYYTEWNPIGRTFRVTGAEGQRLAELDGMPVRDLYNRYLADGLEVPFEQLHNFP
LMVGDPKEQNIHLPLKVIDDGEIEFSGPFHIGDEVRFCYDHPSLTLEQIRLGVQQIGVHA
PQQFFIYNCTSRIDFIDGNQEVETFQNLADTYGVYCMGELYQDDDQQRILHHSLTYLTLR
EGEVEAEGAVPLETQPATNISPLFSLIRNALLDVDDMNNSMASKIQQQATALTASYRIDR
RTGLPNRSVLREKLSKMNADSHLLALKVTTFGQINEKYGYRVGDKLLRDLSEYFQKALWQ
FFDEGCQLYSIGIGEWAVVFESWASHDHIHQRFSEFADKTEHVNFEPMGLPDIDYLSVSI
CAGIASRRDFPTTSIDDLLLKAIEARRSAVSQNKHLVSAKTLIQLEKQRQEQLGWLSCVS
RAVLNQNVVACSQPIVSAHSHQVESYECLVRIEEDGQLIAPGKFLPIIEGTHLYTRLSRQ
MITRTFDFMSQRTDSFSINLAPQDFNNEKTIIHLEQAIKKISHPQRIGLEVLETEQIQDY
GRLIEICNHFRDMGVNIIVDDFGSGYSNIDEILKLEPQVIKLDGSLIRNIDQDKKQRKIA
QQLVSLCQILNAKTVAEFVHNEQVCRIAEDMGVDYLQGYYFGQPQRLF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgacctctctcctgatacaagacatagaacaaacccaacgtgaattggaaaag
atagattttcatacacatgaaagcctactgattcaggtgttttcgtctttcgagaaaggt
tcggttttggctgcctgccaagtaattcaatcgactttccccaacgcaaagatcattggt
tgtagtgccaatcattacatcagccaaggtgtcattttacatcagggcttgtaccttatt
gttactcgcttcgacagcacctcattttcttgtggtgtcgtggaatatagcgagcagcca
caaattgatagccaatcgatgtgggaacagttgggatgtaccgttcagactcaaagtatt
atctgctttgccgatcgcttgcagataaataaccgagccttgttctctgcgtttgaacaa
tccagatactcactgcctatttgtggaggcgcatcgaccattaccgacagtggacgatgg
gttatgctgaatggccattgctatgaaaatgcctacgtaatgctggccttacacagttct
gagttagtcgtaaccaaaggctactacaccgagtggaacccgatagggcgcacctttcga
gtcactggcgctgaaggtcaacgcttggctgaattggatggtatgccagttcgtgatctt
tataatcgctaccttgcggatggcctcgaagtacctttcgagcaactccataacttccct
ttgatggttggcgatccaaaagaacaaaacatccatttaccactcaaggtcattgatgac
ggagagatcgagtttagtggtccgtttcatattggcgatgaggttcggttttgttatgac
catccttctctgaccttggagcagatacgacttggcgttcaacaaattggtgttcatgcc
ccgcaacagttctttatttataactgcacttcgcgtatcgactttattgatggcaaccaa
gaggtggagacttttcaaaacctagcagacacctatggtgtgtattgtatgggcgagctt
tatcaagatgatgatcaacaacgcattctgcatcacagcctaacgtatctcacgctaaga
gagggagaggtggaagctgaaggtgcagttccgcttgagacacaacctgccacgaacata
tcccccttattttcattgattcgtaatgccttgctcgatgttgacgacatgaacaacagc
atggcaagcaaaatccagcagcaagccacggcactgactgccagttaccggattgatcgt
cgaacgggtttacctaatcgaagtgtgttgcgtgaaaagctgtcaaaaatgaatgctgat
agtcacttgttggcgttgaaggtcacgacgtttggacagatcaatgaaaagtacggttat
cgagtgggtgataagctgcttcgtgatttgagtgagtattttcaaaaggcgttatggcag
ttttttgatgaagggtgtcagctttacagcataggtattggcgagtgggcggtagtgttt
gaaagctgggccagccatgatcacattcatcagcgcttttctgagtttgctgataaaacc
gaacacgtaaattttgagccgatgggcttaccggatatcgattatctctcggtttcaatt
tgcgcaggcattgcgagtcgtcgtgattttccaaccacatcgatagatgacttgttactg
aaagctattgaggctcgtcgtagtgcggtaagtcagaataagcatctagtgagcgctaaa
acattaatccaactagagaagcagcggcaagagcaattaggttggttgtcttgtgttagc
cgcgcggtgttgaatcaaaacgttgttgcgtgttctcaacccatagtgtcagcgcacagc
catcaagttgaaagctatgaatgcttggttcgaatagaagaagatggtcagctgatagct
ccaggtaagtttttaccgattatcgagggaacgcatctttatacgcgccttagtcgccag
atgataacgcgtacctttgattttatgagtcaaagaaccgattcgttttctattaatttg
gcgccacaagatttcaacaacgagaaaaccattattcatcttgagcaagccatcaaaaag
atcagtcacccgcagcgcattgggttagaggtactggaaaccgaacagattcaggattac
ggtcgattgattgagatatgtaaccatttccgcgatatgggcgtgaatatcatcgttgat
gattttggctcaggctattcgaacattgatgagatattgaagcttgagccacaggtgata
aagctcgatggcagcctgattcgcaatatcgaccaagacaagaaacagcgtaagatagct
cagcaacttgttagcttgtgccagatactcaatgcgaagacagtggcagagttcgtacat
aatgaacaggtgtgtcgaatcgcagaggatatgggtgtcgattaccttcagggttactac
tttggtcaacctcagcgtttattctaa
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