Vibrio lentus: ISX51_03315
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Entry
ISX51_03315 CDS
T09020
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vle
Vibrio lentus
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vle03021
]
ISX51_03315 (rpoH)
Transcription machinery [BR:
vle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ISX51_03315 (rpoH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WGS61312
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All DBs
Position
ED252-c1:676867..677724
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AA seq
285 aa
AA seq
DB search
MANQSYQMALVTQDSLDSYIRSANSYPMLTPEEERGLAERLHYKGEIDAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAQDA
TFEAPMDDDEGGSAYTAPVYYLEDKASDVAETVEAANWESHTNNRLGLALKSLDERSQHI
VRSRWLDDNKSTLQDLADTYSISAERVRQLEKNAMKKLKQAVGDF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaatcgtatcaaatggctttagtcacacaagatagcttagatagctatatc
cgctcagcgaacagctacccaatgctgacgcctgaagaggaacgtggacttgcagagcga
ttacattacaaaggtgagatcgatgctgcgaaaggtttgatcctttcacacctaagattc
gtggtgcacgttgcaagaggctactctggctacgggctgccaatggctgatctcgtccaa
gaaggtaacatcggcctaatgaaggcggtgaagcgcttcaaccctgaagtgggtgttcga
ctggtttcttttgctgttcactggatcaaagctgagattcacgaatatgtactgcgtaac
tggcgtatcgttaagattgcgacaaccaaagcacagcgcaaactgttctttaacctgcgt
aaatctaagaagcgtttaggttggttcaataatggtgaagttgagactgttgcacgtgaa
ctgggcgttgagccttcagaagttcgtgaaatggagtctcgcttagcggcacaagatgcg
acctttgaagcaccgatggatgacgacgaaggcggttctgcttacacggctccggtttac
tacctagaagacaaagcgtcagacgttgctgaaacggttgaagcggctaactgggaatct
cataccaataatcgcttaggcctcgcattgaagagcttagacgaacgcagccagcacatt
gtgcgctcacgttggttggatgataataagtcgaccctgcaagacttagcggatacctac
agcatctcagctgagcgtgtacgtcagttagagaagaatgccatgaagaagttgaaacaa
gccgttggcgacttctaa
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