Vibrio lentus: ISX51_04150
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Entry
ISX51_04150 CDS
T09020
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vle
Vibrio lentus
Pathway
vle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISX51_04150 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vle03019
]
ISX51_04150 (pcnB)
Enzymes [BR:
vle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ISX51_04150 (pcnB)
Messenger RNA biogenesis [BR:
vle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ISX51_04150 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Isd_H_B_linker
Motif
Other DBs
NCBI-ProteinID:
WGS61446
LinkDB
All DBs
Position
ED252-c1:complement(826653..828008)
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AA seq
451 aa
AA seq
DB search
MNTNDNTPSEQRGFHELALNIYTRQEHNISRKQISDNALKVLYRLNGAGFDAFLVGGGVR
DILLGSQPKDFDIATNATPEQIKNLFRNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQEP
SKNVSAQSKEGMLLRDNVYGSVDEDAERRDFTINAMYYNIADYSIHDYAGGIEDLEDKLI
RLIGDPETRYREDPVRMLRAMRFAAKLDFDIEEDTADPIEELAHLLKDIPAARLYEESLK
LLQSGHGLETYHLMREYNLFQQMFPAVAEHFTEGYDSHTEQMLDLVLDSTDLRIDDGKRV
NPAFMFAAILWYPMNKLADKLVTEQGMAHYDAIMEASNIILDQQVKSIAIPRRHTATIRE
IWQLQVRLPRRNGKRAVRLMELNKFRAGYDFLEMRGEIEGGETKELAKWWERYQTAGRNM
RQAMANDVAAPSKSGHRRRKTYRNKKSKQSE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaacgacaataccccaagcgaacaacgcggattccacgaattagcactgaat
atttatactcgtcaagagcacaatatttcacgcaagcagatcagcgacaacgcactaaaa
gtattatatcgcctaaatggggcgggttttgatgcatttttagtcggtggtggtgtgcgc
gacatcttattgggttctcaaccaaaagattttgatatcgcaaccaacgctacgccagaa
cagatcaaaaacctgtttagaaactgccgcctaattggccgtcgtttccgcttggcacat
atcatgtttggtcgcgacatcatcgaagttgcaactttccgtggccaccatcaagagcca
tcgaaaaacgtgtctgcacaatcgaaagaaggcatgctattacgtgataacgtttatggc
agcgtcgacgaagatgcagaacgtcgcgatttcaccattaacgcgatgtactacaacatt
gccgattacagcatccacgactacgcgggtggtatcgaagatttagaagataagctgatc
cgtttgattggcgatcctgaaactcgttaccgtgaagacccagtacgcatgctacgtgct
atgcgtttcgccgctaaactggatttcgatattgaagaagatactgccgacccaatcgaa
gagctggcacaccttctaaaagatatcccagctgcgcgtctttacgaagaatcactcaag
ttactgcaatcaggacacggcttagaaacttaccacttaatgcgtgagtacaatctattc
caacagatgttcccagccgtggctgagcactttactgaaggttatgattctcataccgag
cagatgcttgatttagtactcgattcaactgaccttcgtatcgacgatggcaagcgagta
aacccagccttcatgtttgcagcgattctttggtacccaatgaataagctagcggacaag
ctagtcactgaacaaggcatggcgcactacgatgcaatcatggaagcaagtaacatcatc
cttgatcagcaagtaaagtcgattgctattcctcgtcgtcacaccgcgactattcgtgaa
atttggcagctgcaagttcgacttccacgtcgcaacggtaaacgtgctgtacgcctaatg
gaactgaacaaattccgtgcaggctacgatttcctagaaatgcgtggcgaaatcgagggt
ggcgaaactaaagagttggcaaaatggtgggagcgttatcaaacagcgggtcgtaatatg
cgccaagctatggctaatgacgttgccgcaccatcaaaatcaggtcatcgtcgccgtaag
acttaccgtaataaaaaaagtaagcaatccgaatga
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