Vibrio lentus: ISX51_05935
Help
Entry
ISX51_05935 CDS
T09020
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vle
Vibrio lentus
Pathway
vle05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ISX51_05935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vle03000
]
ISX51_05935
Transcription factors [BR:
vle03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ISX51_05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MurB_C
Motif
Other DBs
NCBI-ProteinID:
WGS61790
LinkDB
All DBs
Position
ED252-c1:complement(1234954..1235829)
Genome browser
AA seq
291 aa
AA seq
DB search
MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSLNLRLLNRHARKLSLTEA
GERFFNECSPLLQRLSSTAEELTDVCKGASGKIRITAPSNLTKRMMMPMFSEFMTQYPDI
NIELMMNNQADQLDPTEWDVIFRVGPQRDSSLIARKISEVKDILIASPDYLAKNPAPSHA
EELANHSLLKGYPLIKWQLSNSNDETVVNSEKGRFNANALNVVRQACSEGLGITLMPDVM
IREYIEDGSLVQVLDDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYHIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatttaaacctctttcgactcgtcgttgaaaatgggagctacaccgca
acatcgcgcaagactatgattccggttgcgaccattacacgacgcatccaagccctagaa
gactctttgaacctaaggcttctcaatagacacgcgcgtaaactctctttaacagaggct
ggcgaacgttttttcaatgaatgctcacctttactacaacgtctatcttctactgcagaa
gaactcactgacgtatgtaagggcgcttcagggaagattcgcattaccgctccctctaac
ctgaccaagcgcatgatgatgccgatgttcagcgaattcatgactcaatatcctgatatc
aatattgagttaatgatgaataaccaagctgatcagctcgacccaacagagtgggatgtc
attttcagagttggcccgcagcgtgattcaagcttaatcgccagaaagatcagtgaagtc
aaagacattctgatcgcgagccctgactatttagcgaagaacccagctccaagccacgct
gaagaactggcgaatcattctttactcaaaggttacccgctgattaagtggcagctgagt
aattcgaatgacgagacagttgttaatagcgagaaaggtcgtttcaatgcgaatgcgctt
aatgtcgtgagacaagcctgttcagagggcctaggtatcaccctaatgcctgatgtcatg
atccgtgaatacattgaagatggcagcttagtgcaagtcctagacgactggagtgctaac
cctcgtgatatttacatgctttataaccacaaagaccacctgccagagaaggttagattg
tttatcgattttgtgatcgcataccacattcactaa
DBGET
integrated database retrieval system
