KEGG   Vibrio lentus: ISX51_08660
Entry
ISX51_08660       CDS       T09020                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
vle  Vibrio lentus
Pathway
vle03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ISX51_08660 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vle03400]
    ISX51_08660 (uvrA)
DNA repair and recombination proteins [BR:vle03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ISX51_08660 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ISX51_08660 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_23 RsgA_GTPase nSTAND1 AAA_21 DnaJ_CXXCXGXG NACHT AAA_25 zf_C2H2_10
Other DBs
NCBI-ProteinID: WGS59386
LinkDB
Position
ED252-c1:complement(1902549..1905380)
AA seq 943 aa
MDKIEIRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PDHNTPLAAQTISQMVDKVLELPAGSKMMLLAPIVKERKGEHVKTLENLAAQGFIRARID
GETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVGWMDNK
EQEEIVFSANFACPKCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVILDENL
SIAEGAIKGWDQKNYYYFQMLTSLSDHYGFDLYAPFNSLPKKTQEIILKGSGRTEVEFKY
INDRGDIRVKRHPFEGILNTLERRYRDTESSAVREDLAKYISTKSCSSCDGTRLRLEARN
VFIGDTTLPEIVQLSIADALEFFQNLSLSGQRGQIADKVMKEINDRLHFLVNVGLNYLNL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLVHLRDLGNT
VLVVEHDEDAIRCADHVIDIGPGAGVHGGHVVAEGTMQDIIENPNSLTGQYLSGAKEIAV
PEKRTPIDKKKVVEIVGATGNNLKNVTATIPVGLFSCITGVSGSGKSTLINDTFFKVAHT
QLNGATTAVPAQHKKIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE
SRSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRY
KGKTIDEVLEMTVEDAREYFNPVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKL
ARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVVKTADW
ILDLGPEGGQGGGEIVAEGTPEDVALVEGSHTARFLKPMLNLK
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggataaaatagaaattagaggcgctcgtacgcataacctcaaagacattaacctaacc
atacctcgtgataagctgacggttatcaccgggttatcaggttcaggaaagtcgtcactt
gcgtttgataccctctacgcagaaggtcaacgtcgttatgttgagtctttgtcggcctat
gctcgtcaatttctatctctcatggaaaagcctgatgttgaccacatcgaaggtttatct
ccagccatctccatcgaacagaaatcaacttctcacaatcctcgttcaacagttggcacc
atcactgaagtctatgattacctaagactactttatgctcgtgtcggtgaaccgcgctgt
cctgatcacaatacccctcttgcagcacaaaccatcagtcaaatggtcgataaagtctta
gaactgcctgctggttcaaagatgatgctgttggctccgatagtcaaagaacgtaaaggt
gagcacgttaaaacgcttgagaacctagcagctcaaggctttatccgtgcccgtattgat
ggcgagacctgtgatttgtccgatccaccaacattggagttgcacaagaagcacaccatt
gaagttgttgttgatcgctttaaggttcgcccagatcttcaacagcgtttagctgaatcg
tttgagacaacattagagctctctggtggcatcgccgtagtcggttggatggataataaa
gaacaagaagagatcgtattctctgcaaacttcgcttgtccaaagtgtggttacagcatg
caagagcttgagcctcgcctgttctcattcaataacccggcaggtgcttgtggtacgtgt
gatggacttggggttcaacagtattttgacccaagcagagtgattttagatgagaaccta
agtattgctgaaggtgcgattaaaggctgggatcagaaaaattattattatttccaaatg
ctgacatcgctgtcagatcattatggttttgacctttatgctccattcaactctttacca
aagaaaactcaagagatcatcctcaagggctctggtagaactgaagttgaattcaaatac
atcaatgatcgtggtgatatccgagtaaaacgccacccctttgaaggcattttaaatacg
ttagaacgccgttaccgcgacactgaatctagcgcggtacgtgaagatcttgccaagtac
atatcaacgaagtcatgctctagctgtgatggtacgcgcttaagattagaagctcgaaat
gtcttcattggcgataccacactgccagaaatcgttcagctcagtattgctgatgcatta
gagtttttccaaaatttgtcgctcagcggccagcgtggacaaattgccgataaagtgatg
aaagagatcaatgatcgtctgcatttcttggtgaacgtgggtttgaattacctgaaccta
tcacgcagtgcagaaacactgtctggtggtgaagcgcaaaggattcgtctagctagtcaa
attggtgctggtttagttggtgttatgtatgtgctggatgagccatcgattggcctccac
cagcgtgataatgaacgtctactgcaaactctggtgcacctaagagacttaggaaatacc
gtgcttgttgttgagcatgatgaagatgcgattcgttgcgctgaccatgttatcgatatc
ggcccaggcgcaggcgtacatggtggccacgtagtcgccgaaggtaccatgcaagacatc
atcgaaaacccgaattctttgacaggccaatacctgagcggtgctaaagaaattgcagtg
ccagaaaagagaacacctatcgacaagaaaaaggtcgtagagatcgttggcgcgacggga
aacaacctaaagaatgtaactgcgacgatccctgtaggcttgttcagctgtattacgggt
gtatcagggtcaggaaaatctacactaatcaatgacaccttctttaaagtcgcccacact
caattgaacggtgcaaccactgcagttccggcgcagcacaaaaagataaaaggcttagag
catttcgacaaagtgatcgatattgatcaaagccctatcggtcgcacccctagatcaaac
cctgcaacctacactggtattttcacgccaattcgtgagttatttgcaggtacccaagaa
tcacgatctcgtggctacaagccaggtcgattcagttttaacgttcgtggtggtcgctgt
gaagcgtgtcagggagacggtgtcatcaaagtagagatgcatttcttgccagatgtgtat
gtaccgtgtgatgtgtgtaaaggtaagcgttataaccgtgagactctagaggtccgctac
aagggtaaaaccattgacgaagttctagagatgacagtggaagatgctcgtgaatacttc
aacccagtgcctgttattgctcgtaagctgcaaacattgatggatgttggcctttcctac
attcgcctcgggcaagcggcaacaaccttgtctggcggtgaagcacaacgcgttaagtta
gcgcgtgaattgtctaaaagagatacagggaaaaccttatacattctcgatgagccaaca
acaggcctacatttccacgatatccagcaactgttaacggtactgcatagattacgtgat
cacggtaatacggttgtcgtaattgagcataacctagacgtagtcaaaaccgcggactgg
atcctagatcttggccctgaaggtggtcaaggaggcggcgaaattgttgcagaaggtaca
cctgaagatgtggctttagtcgaaggttcgcacactgctcgcttccttaagcctatgtta
aatttgaagtag

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