KEGG   Vibrio lentus: ISX51_09515
Entry
ISX51_09515       CDS       T09020                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
vle  Vibrio lentus
Brite
KEGG Orthology (KO) [BR:vle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vle03009]
    ISX51_09515 (srmB)
Enzymes [BR:vle01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ISX51_09515 (srmB)
Ribosome biogenesis [BR:vle03009]
 Prokaryotic type
  rRNA helicases
   ISX51_09515 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 UMPH-1
Other DBs
NCBI-ProteinID: WGS59550
LinkDB
Position
ED252-c1:complement(2112874..2114139)
AA seq 421 aa
MIRTFAELDLNQELLKAIDEMGYERPTQIQAEAIPQALDGRDVLASAPTGTGKTASFVLP
ALQYLLDFPRKKSGPARMLILTPTRELAMQITEQARELAKYTSLNIFTITGGVMYQEHAD
ILSTTQDIVVATPGRLMEYIEGERFDCRAIEWLVLDEADRMLDMGFGPVVDRLSAECRWR
KQTLLFSATLEGKGIEGFTEDLLKNPAEIDAKSSLRERKKITQWYHRADSAKHKLDILKH
IITEQAERSIIFLKTRDRLGDLRAQLESAQIPCVWIQGEMPQDRRNNAISRFRDGSINVL
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAVSIIEAHDQLMIER
VARYTEDAIKERFIEGMRPTHKKAAVTKKKKPKKEDKKAVAKQKIAKKKKIAKKKKAVKN
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
gtgatcagaacctttgcagaactcgatctaaaccaagagctgcttaaagcaattgacgaa
atgggctacgaacgccctacacagatacaagctgaagcaatcccacaagcgttagatgga
agagacgttttggcttctgcgccaacaggtactggtaaaacagcatcatttgtattgcca
gcactgcaatacctactggatttcccacgtaagaaatctggccctgcacgtatgcttatc
ctgacgccaacgcgtgagctagcaatgcagatcaccgaacaagcacgtgagcttgctaaa
tacaccagcctgaacatctttacgatcacgggcggtgtgatgtaccaagagcacgcagat
atcttaagcacgactcaagatatcgtagtcgcaacacctggtcgtttaatggaatacatt
gaaggcgagcgttttgattgccgtgcgattgaatggttagttctcgatgaagctgaccgt
atgctagacatgggctttggtcctgttgttgaccgtctgtctgcagagtgtcgctggcgt
aaacaaactttactgttctcagcaacgctagaaggtaaaggtattgaaggtttcactgaa
gatcttctgaaaaacccagcagagatcgatgcgaaatcatcactgcgtgaacgtaagaag
atcactcaatggtatcaccgcgccgattcagctaagcacaagcttgatatcctaaaacat
atcatcacagagcaagctgaacgcagcatcatcttcttgaagactcgtgaccgcctaggt
gacctacgagctcaattagaaagtgcacagatcccgtgtgtatggatccaaggtgaaatg
cctcaagatcgtcgtaacaacgcgatttctcgtttccgcgatggttctatcaacgtactg
ctggcaactgacgtcgcagctcgtggtatcgaccttccagatgtaagccacgttattaac
tacgacatgccgcgtacagcagatgtctacctacaccgtatcggccgtacggctcgtgca
ggtaagaaaggtaacgcggtttctatcattgaagcgcacgatcaactaatgattgaacgt
gtggctcgttacactgaagatgcgatcaaagaacgcttcatcgaaggcatgcgcccaacg
cataagaaagccgcggtaacgaagaagaagaaaccgaagaaagaagataagaaagcggta
gcgaagcaaaaaattgctaagaaaaagaaaatcgctaagaaaaagaaagctgttaagaac
aagtaa

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