Vibrio lentus: ISX51_09545
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Entry
ISX51_09545 CDS
T09020
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vle
Vibrio lentus
Pathway
vle03410
Base excision repair
vle03430
Mismatch repair
vle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ISX51_09545 (recJ)
03430 Mismatch repair
ISX51_09545 (recJ)
03440 Homologous recombination
ISX51_09545 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_09545 (recJ)
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ISX51_09545 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ISX51_09545 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ISX51_09545 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WGS59556
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Position
ED252-c1:2119293..2121029
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AA seq
578 aa
AA seq
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MIEIQRRPEVDTSVLPAHLPDLLKRIYVSRGIDSAEQLETAAKGLHSYQKLDGIDAAVEL
LFNAIKLQKRIIVVGDFDADGATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVE
QAIEIGAEVIMTVDNGVSSIDGVRFAKEQGLDVLVTDHHLPGNELPIADAMVNPNLESCA
FPSKALAGVGVAFYLMMALCVHMRKLGWFAQHGMTEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEIAKRDAKRLVASDFGFALGPRINAAGRLDDMSFG
VELLMSNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLEFGKDDLPSGLALFQR
DWHQGVIGILASRIKDKYHRPVIAFADGGEGSIKGSCRSIPGLHMRDALDRIDTQNPGLI
LKFGGHAMAAGLTIMEKDFERFSKMFDDVVRKELGETALKGIILSDGELLPEEFSMHTAE
TLRSGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDL
RRWPDASVKTVNLAFKLDINEFRGNQSLQLMIDHIEAK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatagagatccaacgccgccctgaggtcgatacttcagttttacctgctcacttacct
gacttgttaaagcgcatttatgtgagtcgcggaatcgacagtgcagagcaactggagacg
gctgcgaaaggcttacactcctatcaaaaactggacggtatcgatgccgcggtagaactg
ctttttaatgcgattaagcttcaaaagcgcattatcgttgtcggtgattttgatgctgat
ggcgcgacgagttccgctttgtcggtgttagcactgcgcatgctgggcagttctaatgtc
gattacttagtaccaaaccgctttgaagatggctacggcttgagcccggaggttgttgaa
caagcgattgagattggtgccgaagtgatcatgaccgtggacaacggtgtctcttcgatt
gacggtgttcgcttcgctaaagagcaaggccttgatgtgctggttaccgatcatcacttg
ccgggtaatgaactgccaatcgctgacgcgatggtgaaccccaacctagaaagctgtgca
tttccttcaaaagcactagcgggtgtgggtgtggcgttttacctgatgatggcgctgtgt
gttcatatgcgtaaattgggttggttcgcacaacatggcatgacagaacctaagttgatg
gaactgatcgatttggttgcgttaggtaccgttgccgatgtggtaccactcgatgaaaac
aaccgaattttggtgcatcaaggtttgcagcgtatccgtgcaggcaaagcgcgcccgggt
attcaggccttgattgaaattgctaagcgagacgctaagcgtttggtcgcttcggatttt
ggttttgcacttggccctcgtatcaatgccgcaggccgattggatgatatgtcgtttggt
gttgagttgttgatgagcaataacattcacgccgcgcgtcgaatggccagcgagttagat
ggcttgaaccaaacacgtaaagagatagaagagggcatgaaacaagaggcgatggctttt
tgtgagcgccttgagttcggtaaagatgacctaccttctggcttagccctgttccaacgt
gattggcaccaaggtgtgattggtattttggcttcgcgtatcaaagacaaataccaccgc
ccagtgattgcgttcgctgatggtggggaaggcagcatcaaaggttcatgccgctcgatt
ccgggtttgcacatgcgcgatgcgcttgaccgaatcgatactcaaaaccctggcttgatc
ttgaagtttggtggccatgcaatggcggccggtttgaccattatggaaaaagacttcgag
cgattcagcaagatgtttgatgacgttgtgcgcaaagagctcggtgagacagcgctgaag
ggtatcatcttgtctgatggtgagctgttacctgaagagttctcaatgcacaccgctgaa
acgttgcgttctggtggtccttggggacaagcgttccctgaaccgatcttcgacggtgag
ttcaaagtactgcatcaaaagttggtcggtgaaaaacaccttaaattgatgctagaacct
ttatacaaaggtcatccaaccaacgtaatgatcgatggtattgccttcaacgttgattta
cgtcgctggccagatgcgtccgtgaaaacggtgaacctcgcgtttaagctggatatcaac
gagtttcgtggcaaccaatctttgcagttgatgattgatcatattgaagctaaatag
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