Vibrio lentus: ISX51_10405
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Entry
ISX51_10405 CDS
T09020
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vle
Vibrio lentus
Pathway
vle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ISX51_10405 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_10405 (recC)
Enzymes [BR:
vle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ISX51_10405 (recC)
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ISX51_10405 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WGS59709
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All DBs
Position
ED252-c1:2323614..2327090
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AA seq
1158 aa
AA seq
DB search
MFTVYHSNKVDTLKILLVHLIKSDPLANPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWDMFTQVLPDVPKRSAFNKEAMTWKLMSLLPAKLDHPDFLPLQRYLENDED
DSKLYQLAEKIADIFDGYLVYRPEWMAMWEAGEPVAELVDDEGQQEHPWQPILWQALYEQ
TLSQGQSKYHRGNLYHDFIEALANQQGQLQHLPKRLFVFGISSLPPRYMDALRALGEQID
VHLMFTNPCQHYWGDIRDRKYLARVEAQRRKQFALVDGLPQLEGEVSPLKDGIEANVEDE
LHTSQAVGNSLLASMGKLGRDNLFLLSQSDSEEHEFFIDVERDNLLHQLQADILQLEEHQ
DDHILDSSNHKQVVELGDRSLTVHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVS
DINAYSPAIQAVFGNAPGERYIPYSISDRTADQESPILTAFMQLVALPNTRCLASELLEL
LEIPAMMARFGIDEFQFEQAKQWVEEAGIRWGVDASTATEFDLPATEQNTWLFGIQRMLL
GYAMSDSAGLFETEHSPIAAYNEVQGINAELAGKLAHFIDRIAHYRQRLTETQSIDMWRE
TLLQMIDDFFAVELEGEVVLKSIRDALSQLNEQLDDALYEQELSPSIIYQYLNNKLSGAR
ISQRFLAGQVNFCTLMPMRSIPFKTVCLLGMNDGVYPRSMPPEGFDLMNGRTRPGDRSRR
DDDRYLFLEAMLSAQECLYISYVGRSIQDNTERVPSVLVSELIEYCQQNYCLSEDQALPS
DDSGLNLTQAISFEHTMTPFSPAVFTQGDASHVLSYAKEWLPAANRSGERSGEFNRALDD
YLLGATYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFVLNGLESFQLK
DALLQVLLDHPEGADEAVRLFVSEQKAQGRLPVGAFGDIEFETNRVQAEDLAKEIRFVSG
SPQQDLEVNIEFDVLGEGKPVRLMGWLTQNYQSGLVRFRSGKIRSQDYLAAWVDHLCCAV
MGHGKTTHIIGYDRKEGVVHQTLQPIGDAQQAKSLLAELVRLFYQGMTAPLPYFPKTALA
GVEAGFSRGKWVDDEEKSLKKMADTFNDSFAFTGEGRDTYISRIWSKWDDELATESRMYS
TLVLQAARLAAADLEDQE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttaccattccaataaagtcgatactttaaaaatccttctcgttcactta
atcaaaagtgatcctttagccaaccctttcgaaaaagagcagatcttggttcagagccct
ggtatgtctcaatggcttaagatggaactcgccaaagagtttggtgtagcagcaaatata
gactttcctcttccagcaaccttcatttgggatatgtttacccaagtgcttcctgatgta
cctaaacgcagtgcttttaacaaagaagcaatgacgtggaagttgatgagtttgctaccc
gctaagcttgaccaccctgatttcttgcctctgcaacgttatcttgaaaatgatgaagat
gactctaagttgtatcaattggcagagaaaattgccgatatcttcgatggttacttggtg
tatcgaccagagtggatggcgatgtgggaagcgggagagcccgttgctgaattggtcgat
gatgaagggcagcaagagcacccttggcaaccgattttgtggcaagcactctatgagcaa
actctgtctcaaggccaatcaaaataccaccgtggcaatttgtaccacgacttcattgaa
gcgctagccaatcaacaaggtcaattacagcatctgcctaaacgcttatttgtgtttggt
atttcttcgttgccacctcgttacatggatgcgttgagggctctaggtgagcagattgat
gtgcacttgatgttcaccaacccttgccaacattactggggcgatattcgcgaccgtaaa
tatttggcaagagtcgaagcacagcgccgcaagcagtttgcgttggttgatggtttacct
caactagaaggcgaagtatcaccattgaaagatggcattgaagccaacgttgaagacgaa
ctgcataccagccaagccgtgggtaatagtttacttgcgtctatgggtaagctgggcaga
gataacctgtttttactatcccaatcagacagcgaagagcatgagttctttattgatgtt
gagagggataacctgcttcatcaactgcaagccgatattctccagttagaagaacatcaa
gacgaccacatcttagactccagcaatcataaacaggtggttgagcttggcgatcgctcg
ttgacggtacacgcttgtcatagcccaatgcgtgaggttgaagtccttcatgatcagttg
ttggcgatgtttgatgccgatccgacactaaaaccacgcgatatcatcgtaatggtatct
gacattaatgcttatagcccagcgattcaggcggtatttggtaatgctccgggtgagcgt
tatatcccttactcgatctctgatagaaccgcagaccaagaaagcccaattttgaccgcc
ttcatgcagttggtcgcgctaccgaacacgcgctgtttagcctctgagttgctagagctg
ttagaaattcctgcaatgatggcacgctttggtattgatgagtttcaattcgagcaagcc
aagcagtgggttgaagaagcgggtatccgttggggtgtcgatgcttcaacggcgacagaa
tttgatttacctgcgaccgagcaaaacacttggctctttggtattcagcgcatgttactg
ggctatgcgatgtcagactctgcgggcttgtttgaaactgaacactctccaattgccgct
tataacgaagttcaaggcattaacgccgaacttgccggtaagttagctcactttattgac
cgcattgcccattaccgtcaacgtttaactgaaacacaatctatcgatatgtggcgtgaa
accttgctgcaaatgattgatgatttctttgcagtggagctagaaggcgaggtggtgctc
aaatcgattcgtgatgcactttcgcaactgaacgaacagcttgatgatgccttgtacgaa
caagaactgtcgccaagcattatctaccagtacctcaataataagttatctggcgcgcgc
attagccagcgtttcttagctggccaagttaacttttgtaccttgatgccgatgcgttct
attccgttcaaaaccgtctgtttgttaggcatgaatgatggtgtttaccctcgctcaatg
ccgccagaaggttttgatttgatgaacgggcgtacgcgtcctggcgatcgttctcgccgt
gatgatgaccgctatctattcttagaggcgatgctgtcagcgcaagaatgcttgtacatc
agctatgttggccgttcgattcaagataatactgagcgagtgccatcggtgttggtttca
gagttgattgaatactgccaacagaattactgtttgagtgaagaccaagccttaccaagt
gatgattctgggctcaacctgactcaagcgatcagctttgaacacaccatgacaccgttt
agcccagcagtgtttactcaaggtgatgcgagccatgtgctgagttacgccaaagagtgg
cttccagcggctaaccgttccggtgaacgcagtggtgaattcaatcgtgcattggatgac
tatttgttgggtgcgacgtacccgttagaactcgatttggttgagttacagcgtttttgg
cgtttgccagtgcagtatttctttaatcgccgtctaaaagtggtgtttgagccgccactt
cctgtgatggaagacgatgagccatttgtacttaatggtttagagagtttccaactaaag
gatgctttgctgcaagtgttactggaccaccctgaaggcgcagacgaagccgttcgattg
tttgtctctgagcaaaaagcacagggcagattaccggttggcgcctttggtgatatcgaa
tttgaaaccaaccgtgttcaagcggaagacttagccaaagagattcgatttgtgagcggc
tcgccgcaacaagatctcgaagtgaatatcgaatttgatgtgttaggcgaaggcaaacct
gttcgcttgatgggttggttaactcaaaactatcaatcgggtctagtgcgtttccgtagc
ggtaaaatacgctctcaagattatttggcagcgtgggttgatcatctatgttgtgcagtg
atgggacacggaaaaacgacccatattattggctacgacagaaaagagggcgttgttcac
caaacgctacagcctatcggcgatgcgcagcaagcgaagagcttgttggctgagttagta
cgactgttttatcaaggcatgacagcaccgctaccttacttcccgaaaaccgcattggct
ggcgttgaagcgggttttagccgtggtaaatgggtcgatgacgaagaaaagtcacttaag
aaaatggctgatacctttaatgacagcttcgcctttacgggcgagggcagagatacttac
atctctcgaatttggtctaagtgggatgatgaactggctactgagtcgcgtatgtattca
acgcttgtgttacaggcggcaagattggctgctgccgatcttgaagatcaggaataa
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integrated database retrieval system
