Vibrio lentus: ISX51_11255
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Entry
ISX51_11255 CDS
T09020
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vle
Vibrio lentus
Pathway
vle02020
Two-component system
vle02040
Flagellar assembly
vle05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ISX51_11255
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ISX51_11255
09142 Cell motility
02040 Flagellar assembly
ISX51_11255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vle03021
]
ISX51_11255
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vle02035
]
ISX51_11255
Transcription machinery [BR:
vle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ISX51_11255
Bacterial motility proteins [BR:
vle02035
]
Flagellar system
Flagellar assembly proteins
Stator
ISX51_11255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
Rv2175c_wHTH
Frankia_peptide
GerE
HTH_28
MarR_2
UPF0175
HTH_24
MarR
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
WGS59856
LinkDB
All DBs
Position
ED252-c1:2489829..2490563
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYDQHANLNSQQAFFEKYSVLVKRIAHHLLGRLPPNVLVDDLIQAGMIGLIEAQQ
NYDGTKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKNNREISSAIAELESVLNRDPSD
AEVAKHMGLSLDQYHSALTDINCSRLVGIEDLGVSDDVISPNEDSQDNTPFQGVADESFR
QALIDSIKQLPEREGLVLSLYYDEELNLKEIGEVLGVSESRVSQILSQSMQRLRTKLSAW
TQND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgcttacctacgatcagcatgcaaatctcaatagccagcaggcttttttt
gagaagtactctgtgttggttaaacgtatcgctcatcacttgttggggcgattgccgcct
aatgtattggttgatgacttaattcaagctggcatgattggcttgattgaagcgcaacaa
aactatgatggtacgaaaggcgcaagctttgagacgtatgcaggtattcgaattcgtggc
gctatgttggatgacattcgccgtggggattgggtgccaagatcggttcataaaaataat
cgagaaatcagcagtgcgattgcagaactggagagtgttcttaatcgagacccaagtgat
gccgaagtggcaaaacacatggggctcagtttagaccagtatcacagtgctttaaccgat
attaactgctcaagattggtcggtatcgaagatttaggcgtctcggatgatgtcatatct
ccgaatgaagactctcaagacaatacgccttttcaaggggttgctgatgagtcattccgc
caagctttgatcgattcgataaaacaacttccagaaagggaaggcctcgtgctttcgctt
tattacgacgaagaactcaatttaaaagagattggggaagtgttaggtgtcagcgaatct
cgtgtcagccaaatactgagccaatctatgcagcgtttacgcactaagttaagtgcttgg
acacagaacgactaa
DBGET
integrated database retrieval system
