KEGG   Vibrio lentus: ISX51_13305
Entry
ISX51_13305       CDS       T09020                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vle  Vibrio lentus
Pathway
vle03030  DNA replication
vle03430  Mismatch repair
vle03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ISX51_13305
   03430 Mismatch repair
    ISX51_13305
   03440 Homologous recombination
    ISX51_13305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vle03032]
    ISX51_13305
   03400 DNA repair and recombination proteins [BR:vle03400]
    ISX51_13305
Enzymes [BR:vle01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ISX51_13305
DNA replication proteins [BR:vle03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ISX51_13305
DNA repair and recombination proteins [BR:vle03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ISX51_13305
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: WGS60249
LinkDB
Position
ED252-c1:complement(2960464..2961180)
AA seq 238 aa
MNKLFRSPAVDWPFKFAQKLERARDDRLKHFYSQPLPAPDTPLSEVTFLAVDFETTGLNP
NKDGIITIGLVPFTLNRIYLRQAKHWTLRPKQKLEEESVVIHGITHNDIIDAPDLSEVLG
EILESMAGHIPVVHYRRIERDFLDNALKVRLGEGIEFPVLDTLEIESQIQNKLAGGLWNK
LKGKKPASVRLGQSRRRYHLPDYTPHHALTDAIATAELLQAQIAHHFDSEMPLKNFWL
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaacaaactattcagatcacctgcggtcgattggccatttaagtttgctcagaaactc
gaacgcgcgcgagacgaccgcttaaagcacttttatagccaacctcttcctgcgcctgat
acgccactttcagaagtgaccttcttggctgtcgactttgaaaccacggggttaaaccca
aacaaagacggcatcattaccattggtttagtgccctttacactcaatcgcatctacttg
cgacaagccaaacactggacgctaagaccaaaacagaagctggaagaagagtctgttgtg
attcatggcatcactcacaatgacatcattgatgcgccagatcttagcgaagtgctaggc
gagatcttagagtcaatggcaggacatatcccagtggttcactatcgtcgtatcgaacgc
gatttcttggacaatgcattgaaagtacgacttggtgaagggattgagtttccagtcctc
gacacactcgagattgaatctcagatccagaacaaactggctggcggcttgtggaataag
ctaaaaggtaagaaacctgcttcagtgagattggggcagagtcgtcgtcgatatcacctg
cccgactacacgccacaccacgcgctaaccgatgccatagcgacagcagagctactccaa
gcgcagatcgctcaccactttgactctgagatgcctttgaagaacttctggctctag

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