Vibrio lentus: ISX51_14515
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Entry
ISX51_14515 CDS
T09020
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vle
Vibrio lentus
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_14515
DNA repair and recombination proteins [BR:
vle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ISX51_14515
Archaeal homologous recombinant proteins
ISX51_14515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WGS60475
LinkDB
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Position
ED252-c1:3223586..3227308
Genome browser
AA seq
1240 aa
AA seq
DB search
MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR
LKSIAKGTNEIMTRGTGECFAEIEFEVKGKTYRSNFHHKRARGKHDGALQTPTCEFADAD
SDAVLETQLTKKIKMVETVTGLDFSRFTKSIMLSQGEFAAFLNANANDRAELLEELTGTE
VYSLISERIYDHFKSSEESLNHLKAKAEGVSLLSEEQIQELTKEHGHLESEQKRLAEQLT
EWNAHLGWWKDVGKAEQVIAASNHDLKTAQDSLVENQPSLDRLANSEPAEKLRPLHKDLK
RCGQEVVTTQANLESSTKRLAERDTEKNAAQQSVNNHIKLVDVAKQEQQDQEKIIEQVRP
LDNQIAMLKDKQVASSKTVNTLNQQKVEKSQLQVSLNQTVESIKQQEKIAAQYLVANQAD
SLLEKYLGQWQIKVTQVRDLERQHKELLNSVQASERTLATQQAALQAAKDSKLAQDKALT
ELVSAENQAKQQWDALQQQANEHTLNVQKEVLEHWSRNTNTLVDINRGFVQATQRITSKS
VELQTNTQLSERLTKEREVLVERYQNNKTSLERLTRLIDQEGELAKYRAALKPNSECPLC
GSTEHTVEQSQDIADLVAQKEREEQELAVIQKDGTEHRQQLDSLVPIINGLNDEIQRAQA
DIEQAKLNWANLVAKLEQSNAILLAQNCPLNIYLPNVEGLGNSDVVQSFVDACEQQLNNT
IVLLRNMADAKNAYLDAEKQRAATALIVEKAQSNLELAEQRLADLSTQTNALIDQAAKCA
QAKESEWQGLRESILQTSIEAPELAHIDAWFAQKLEASNTWLTTKQQHDELDKQLISQHA
ELKALDDKLEALAKDITVANQEVELLSKELTVVTESRTQLFGTQDIQVATNIMKQKVIDA
VSAHDAAQTTFNRCELDHRTELTKNTSYSDELVTKQTALTEVTSLWTQALTTSPFATEDE
FESALLDEAVTVQLQSLKKTLEEAMVSAQARLNSANANLVELKGHDKAEAWQQLPLQEVE
QAVTDCSNAQQSHATKIGAISANLETDRQNRSNQQDLFKQIEVQQLEFDDISRLNSLIGS
RNGDKFRKFAQGLTLENLVYLANKQLQRLHGRYELKRKADDGLELQVLDTWQGDVMRDTK
TLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSDTLDIALNALDNLNASGK
MIGVISHVEALKERVPVQLKVTKHSGLGVSEMEKQYKVIA
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttaagcctagaatttgaaaacctgaactctctgaaaggtcgttggaagctc
gactttactcagtcaccgtttgcagaaaatggtctgtttgcgatcaccggcccaacgggt
gcgggtaagacaacgattcttgatgcgatttgtttggcactgttccaccgaacaccgcgt
ttgaaaagtatcgctaaaggcaccaacgagatcatgacgcgcggtaccggtgagtgtttc
gctgagattgaatttgaagtgaagggtaaaacttaccgttctaattttcatcataagaga
gcgcgcggaaaacacgacggtgcgctgcagacaccaacctgtgaatttgcagatgccgat
agtgatgctgtattagaaacgcagctcactaagaaaattaagatggttgagaccgtgacc
ggtttggacttctcgcgattcactaaatctatcatgttgtcgcaaggtgagtttgccgct
ttcttgaatgccaacgctaacgaccgtgccgagttattggaagagcttacgggtaccgaa
gtttatagcctgatttcagagcgtatttacgatcacttcaagtcgagcgaagaatcactc
aaccaccttaaagctaaggctgagggcgtgagcttactttctgaagagcagattcaagag
ctgaccaaagaacatggtcatctagaatccgaacagaaacgtttggccgaacaacttact
gagtggaacgcgcatttaggctggtggaaagatgtcggtaaagccgaacaggttattgcg
gcaagcaatcatgacttaaaaacagcgcaagacagccttgttgaaaatcaaccatcgtta
gatcgtttagcgaatagcgagcctgctgaaaaactgcgtccgcttcataaagatttaaaa
cgttgtggccaagaagttgtgacgactcaagctaaccttgaaagtagtaccaagcgatta
gctgagcgagatacagaaaaaaacgcggcacaacagagcgttaataaccacatcaagttg
gttgatgtcgctaaacaagaacagcaagatcaagagaagatcattgagcaggttcgcccg
ttagataaccaaattgcaatgttgaaagacaaacaagtagcgagttctaaaacggtaaat
acgcttaatcaacaaaaggttgagaaaagtcagctacaagtctctttgaatcaaacggtt
gaatccattaagcagcaagaaaagatcgctgcgcaatatttagtagctaaccaagctgat
agcctgcttgaaaagtatttgggtcaatggcaaatcaaggtgactcaggttcgagatctt
gagcgtcaacacaaggaacttttaaatagtgttcaagcttcagagcgcacgctggccact
cagcaagcagcgttacaggcagctaaagactctaaattggctcaagacaaagcactcaca
gagttagtctcagcagagaaccaagctaaacagcaatgggatgctttacagcaacaagcc
aatgaacatacccttaatgtacaaaaagaggtgcttgagcactggagccgtaataccaat
acgctggtggacattaatcgcggctttgttcaggcgactcagcgtataacgtctaaatct
gtcgaattgcagactaatacacaacttagcgaaaggctcacaaaagagcgtgaagtgctg
gtggaacgttatcagaataataagacatcgttggagcgtttaactcgcctaattgaccaa
gagggtgaattagccaaatatcgcgcggcgttgaagccaaattcagaatgcccactgtgc
ggttcaaccgagcatactgttgagcaatctcaggatatcgctgatcttgttgcacaaaaa
gagcgagaagagcaagagttagccgttattcagaaagacggtacagagcaccgtcaacaa
ctggattcactggttcctatcatcaatggcctcaacgatgaaattcagcgtgctcaagca
gacatcgaacaagccaaactgaattgggcaaaccttgtagccaagctagagcaaagcaat
gcaattttattggctcagaattgcccactcaatatctatctgccaaatgtagaagggtta
ggtaatagcgatgttgttcagtcgttcgttgatgcttgtgagcagcagcttaacaacacg
atcgtactcctgcgcaatatggctgatgcaaaaaatgcctaccttgatgcagagaagcag
cgtgcagcaaccgctctgattgttgagaaagctcaatctaatcttgaactcgcagaacaa
cgactcgcagatctttctacacaaacgaacgcattgattgatcaggccgctaaatgtgcg
caagcgaaagagtctgaatggcaagggcttagagaaagcattcttcaaacatcgattgaa
gcgcctgagttagcgcatatcgatgcttggtttgctcaaaagcttgaagcctctaatacg
tggcttaccacaaaacagcagcatgatgagttagataagcagttgattagccaacacgct
gaactgaaagcactcgatgacaaactagaagccttagcgaaagacatcacggtggcgaat
caagaggttgagttgttgtcgaaagagctgacggttgtgaccgaatctagaacgcagctg
tttggtacacaagacattcaagtcgcaactaacatcatgaaacaaaaagtgatcgatgcc
gtcagcgcacacgatgccgctcaaacaacgtttaaccgttgtgaactcgaccaccgaaca
gagctgactaagaacactagttacagtgatgagttagtgacgaaacagacagcactgact
gaagtgacatcgctttggacacaagcattaacgacaagtccatttgctaccgaagatgag
tttgagtcggcactgttggatgaagctgtgacggtgcaactgcaaagccttaagaaaacg
ctggaagaggcgatggttagtgcccaagctcgtttgaattcagccaacgcgaatctagtc
gaacttaaaggtcatgataaagcggaagcttggcaacaacttccactacaggaagtagaa
caagccgtgacggactgttccaatgcacagcaaagtcatgcgacgaaaattggtgcgatt
tctgcaaacttggaaacggatcgccaaaaccgcagtaatcaacaagacttgttcaaacag
atcgaagtacaacaacttgagtttgacgacatctcacgtcttaattcgttgattggctct
agaaatggcgacaagttccgaaagtttgctcaagggttaacgttagagaacttggtgtac
ttggccaacaaacaattgcaacgtctacacggtcgttacgagctaaaacgtaaagccgat
gacgggttagaactgcaagtgttggatacatggcagggcgatgtgatgcgtgatactaag
accttgtcaggtggcgaaagcttcttggtgagcttggcattggcactcgcgctatctgat
cttgtgagtcataaaaccagtattgattcattgttcttggatgaaggtttcggcacgctc
gatagcgacacattggatattgcacttaacgcgctcgataacctgaatgcgtcaggcaag
atgattggcgtaatcagccacgttgaagcactgaaagagcgagtacccgtgcaacttaaa
gtgacaaaacattcaggccttggcgtgagtgagatggagaagcagtacaaggttattgct
taa
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