Vibrio lentus: ISX51_19040
Help
Entry
ISX51_19040 CDS
T09020
Name
(GenBank) EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vle
Vibrio lentus
Pathway
vle05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ISX51_19040
Enzymes [BR:
vle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ISX51_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Hom_end
IPT
Motif
Other DBs
NCBI-ProteinID:
WGS63699
LinkDB
All DBs
Position
ED252-c2:784344..786251
Genome browser
AA seq
635 aa
AA seq
DB search
MKKIKTLDLDIPDDMKSGWQNIVDLLAQITEVPAALIMRVHSNSIEVFSTSRSENNPYTQ
GDSETLGNGLYCESVMESQQHLVVPNALADPEWEDNPDIKLGLVSYCGIPLLWPNGELFG
TICILDSKENHYTPTYIKLLESFRTSIESQLKTLFQHAKLTQMNEELKNRVYTRTKDLAS
LNYSLNQEIDKRKAAEQKINFQKNHDLGTGFLNRNAFESRLNQRLSTQNRLTDCSYAVIH
IGFTNGRRIQARYGYNALDQVLVEYRQRIESISDVEVFTARPTSVDLVLAFSVKDLQYRL
EELCKSLVNVGHSEFAIDNDKVHLHAFIGIAITDNEDDAESTLQKSSEAMLACKDSGQKF
AYYSQSHTEEQSHLNKIEGYLLHAVRNDDLMLYFQPKVCPLTHRWVGAEALLRWRHPVLG
DISNETLIHMAEQNGLIFEVGSFVLRNAIEKAKEWSQYVDDFKMAVNVSAVQLKNVHFAE
QVIHLLETYHLEPHFLELEVTESGLIADEVVAKNTLESLHDIGVTLSLDDFGTGYASFSY
LKKFPFDSIKIDKSFVDQMLNSSEDKEIVRSIVQIAKKLDLKVTIEGIESEVQEQFIIEE
GCDVGQGYLYGKPMPGQEFKHSLVNQNYLGSTRYA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattaaaactctagatttagacatcccagacgacatgaaatccggttggcaa
aatattgtcgacttgctagctcagatcactgaggtcccagcggctctcatcatgcgtgtc
cacagcaactccatcgaagttttttcaaccagccgtagcgaaaataacccctatacccaa
ggcgactcagaaacattaggcaatggcttgtactgcgaaagcgtaatggaatctcagcaa
catctcgttgttcctaacgccttggctgatcccgagtgggaagataatcctgatatcaaa
cttggtttggtctcttattgtggtattccgttactttggccgaatggcgagttgttcggt
acgatctgcatcttagattctaaagaaaaccactacacacctacctatatcaagttactc
gaaagctttcgtacttcaatcgaatctcaactcaagacattgtttcagcacgcgaaactg
actcagatgaatgaagagttaaaaaaccgcgtttacactcgaactaaagatcttgcgagc
ctgaactactcactcaaccaagagattgataagcgcaaagcggctgaacaaaaaatcaat
ttccagaagaaccacgatcttggtaccggatttttgaaccgcaatgcatttgaatctcgc
ttaaaccaaaggttgtctacacagaatagactgaccgattgttcttacgctgtcattcat
atcggctttaccaatggtcgacgcatccaagctcgttacggttataacgcattagaccaa
gtgttggttgaataccgtcaacgaatcgaaagcatctccgatgttgaagttttcacggcg
cgccctacttctgttgacctcgtattggcgttcagcgttaaggatttacagtatcgcctc
gaagaactgtgcaagagtttggttaatgttggtcattcagaattcgccatagataatgac
aaggttcatttgcatgcttttattggtattgcgataactgacaacgaagacgatgctgaa
agtacgctgcaaaagtcgtcagaagcgatgcttgcctgtaaagactcagggcaaaagttt
gcttattactctcagtcacataccgaagaacaaagtcacctgaataagatcgaaggttat
ttgttacacgccgttcgtaatgacgacttgatgctctatttccagccaaaagtctgcccg
ctcactcatcgctgggttggcgcagaagcattgttgcggtggaggcaccctgttcttggc
gacatctctaacgaaaccttgattcacatggcggaacagaatggtttgatcttcgaggtt
ggcagctttgtgttgcgtaacgcgattgaaaaagccaaagagtggtcacaatacgtcgat
gatttcaaaatggcggttaatgtgtctgccgttcaacttaaaaacgtgcattttgccgag
caagttattcacctcttagaaacctatcaccttgaaccgcattttttagaactcgaagtc
actgaaagcggcctgatcgcggatgaagtggtggcaaagaacaccttagaatctttgcat
gatataggtgttacattgtcacttgatgatttcggtacaggctatgcctcattcagttac
ctcaagaagttcccattcgactcaatcaagatcgataaaagctttgtcgaccaaatgttg
aactcaagtgaagacaaagagattgttcgttctattgttcaaattgccaaaaaactcgac
ttaaaagtcaccattgaaggtattgagtcagaggttcaggagcaattcatcattgaagaa
ggctgcgatgttggacaaggttacctctacggaaagccgatgcctgggcaagaattcaaa
catagcttagtcaatcaaaactatttggggtcaactcgttacgcttaa
DBGET
integrated database retrieval system
