KEGG   Vibrio lentus: ISX51_21510
Entry
ISX51_21510       CDS       T09020                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vle  Vibrio lentus
Pathway
vle02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vle00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ISX51_21510
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vle02022]
    ISX51_21510
Two-component system [BR:vle02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   ISX51_21510
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_2 AAA_5 AAA Mg_chelatase FleQ bpMoxR HTH_30 ThiG AAA_7 TrmB
Other DBs
NCBI-ProteinID: WGS62614
LinkDB
Position
ED252-c2:complement(1372284..1373636)
AA seq 450 aa
MTAEKHIVLIDDEIDVVEAVSEMLELEGFSVTAFTDPNLGLKSLKANSQSVVLCDVRMPQ
VDGLTLLSSIQHRAANVPVLLMSGHGDIPMAIEAMKLGAFDFLEKPLNSSELVEKLDLAL
AQSQHNCPAIRGGDEEVELSIETVVIGQSKAMDTIRKQVLALSHTGVDTIINGETGTGKE
VIARALHQFSRRKAKPFVAINCGGMTESIIESELFGHEAGSFTSANKKRIGKIEQANGGT
LFLDEIESMPIAVQIKLLRVIQERVIERVGGNELIPVDIVVVAASKADLASLSETGEFRA
DLFYRLNIASLNLPALRQRKEDIQVLFRHFVIQASHKYKTRPSTIYPEQIQQLCRHEWPG
NVRELRNVADRFVLGIVGDGFDLQSPICESSGEDFAFEKQMEQYERNVLTEALIESAGNI
NEVSSKLNLPRKTLYRKMKKHQLDKESFKA
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgactgcagaaaaacacatagttcttatcgatgatgaaatcgatgtcgttgaagccgtg
agtgaaatgttagaactagaagggtttagcgtcactgcctttactgaccctaaccttggc
cttaaatcactcaaagcaaacagccagtcggttgtattgtgtgatgtacgaatgccacag
gtggatgggcttacgttgctgagttcgattcaacatagagccgctaacgtccctgtattg
ttgatgagtggccatggcgatattcccatggcgatagaggcaatgaagctaggcgctttc
gattttctggaaaaaccgcttaattcgagtgagctggtagagaagctagacttggcgttg
gcacaatctcagcacaattgcccagcaattagaggcggtgatgaggaagttgagttatcg
attgaaacggtggttattggccaatcaaaagcgatggatacgatacgtaagcaagtgctt
gcgctgtctcatactggtgttgataccatcatcaacggcgaaacaggaacgggcaaagaa
gtaattgctcgcgcgttgcatcaatttagccgtcgcaaggcgaagccctttgtcgcgatc
aactgtggcggcatgacagaaagcattatcgaaagtgagttgtttggccatgaagcgggt
tcgtttaccagtgccaacaagaaacgcattggcaaaatagaacaagccaatggcggaact
ctgtttcttgacgaaatagaaagtatgccaattgcggtgcaaattaaactgctgcgcgtc
attcaagaacgagtgattgagcgcgttggtggtaacgagttaatcccggtcgatatcgtg
gtggtagccgccagcaaagctgatctcgcgagcttgagtgaaacgggtgagttcagagcc
gatctcttctatcgtcttaatattgctagtttaaaccttcccgcattgcgtcaacgcaaa
gaagacattcaggtgttattccgccattttgtgattcaagcgagtcataaatacaagacg
cgtccgtcaacgatctatcccgaacaaatacagcagctatgtcgacacgaatggccgggt
aacgtgcgtgaattacgcaatgtcgccgaccgatttgtacttggtattgtcggtgatggt
ttcgatcttcaatctccgatttgcgaatcgtccggagaagatttcgcctttgaaaaacag
atggagcagtacgaacgaaatgttctgactgaggcgcttattgagagcgcaggcaacatc
aatgaggtctcaagcaagctgaacctgccacgcaaaacgctttatcgaaaaatgaagaaa
caccaattggataaagagagcttcaaagcctaa

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