Vibrio lentus: ISX51_23240
Help
Entry
ISX51_23240 CDS
T09020
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vle
Vibrio lentus
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vle03400
]
ISX51_23240 (phrB)
Enzymes [BR:
vle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ISX51_23240 (phrB)
DNA repair and recombination proteins [BR:
vle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ISX51_23240 (phrB)
Prokaryotic type
ISX51_23240 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WGS62946
LinkDB
All DBs
Position
ED252-c2:complement(1772356..1773816)
Genome browser
AA seq
486 aa
AA seq
DB search
MSDILWIRRDLRIHDNPALVSAVENGVSIAVFISTPQQWQQHHLAPIKADFIYRHLKQFE
SQLAEFGITLLHLKATDFNDQATQLINLCKQVDATCVYANSEPEVDEQLRDKRLIATGIK
LKITDCDTILPLGSVLNKQGEMFKVFTPFKNAWLKEVQAKGIICSHAPVHSQGSAQAGSA
QAGSSETDSLQNPSQLKQSLSGFSGEYDFDFPRTDSERWPLSQDVLESVIPNFLANKVND
YSRLRDIPSVKGTSGLSPYLTIGAVSPRWLAIQLIQQQPDLLFDTQLPAFSWLNELIWRD
FYKHLMFHHPKLVKGANFQQKYNGLDWYHDNPSFKAWCEGKTGYPLVDAAMRQLVETGWM
HNRLRMVVASFLTKHLLIDWRWGERFFMSHLIDGDFSANNGGWQWASSTGCDAQPYFRIF
NPITQSEKFDPKGIFIRKYIPELQNIPDKHVHFPHDYIAKNGINSEYWQPIVEHKEARLR
ALAFFK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacattctatggataagacgagacctgaggattcacgataacccagcgctcgtc
tctgcagttgaaaacggcgtctctatcgccgtttttatttcaaccccgcagcaatggcag
caacatcacctggcaccgataaaggcggacttcatttatcgccacctgaaacagttcgag
tcacaactcgctgaattcggtatcactttgctgcacctcaaagccacagactttaacgat
caagctactcaactcatcaacttgtgcaaacaggtcgatgcgacatgtgtgtatgccaat
tcagagccggaagtggatgagcagttaagagacaaacgcttaatcgctactggtataaag
ctgaaaataaccgactgcgatacgattctgccattaggtagcgtactgaataaacaaggc
gagatgttcaaggttttcacacctttcaaaaacgcatggttaaaagaagtacaagcgaaa
ggcatcatttgcagccacgctccagtgcattcacaaggatcggcacaagcaggatcagcg
caagcaggttcatctgaaacggattcgcttcagaatccatcacaactaaaacaatcgtta
agtggtttttctggcgagtacgatttcgactttccgcgtaccgattcagagcgttggcca
ctaagccaagacgtccttgagagcgtgatccccaatttcttagccaataaagttaacgat
tattctcgccttagagatattccatcggtaaaaggcacgtctggcctgtccccttactta
accattggcgctgtgagcccacgatggttagcgattcaattgattcaacaacagccggac
ttgttatttgatactcagttgccagccttttcttggcttaatgaattgatttggcgagat
ttttataagcatttgatgttccaccatcctaaactggttaaaggtgcgaactttcagcag
aaatacaacggcttagattggtatcacgacaaccctagctttaaggcttggtgtgagggt
aagacaggctacccattagttgatgcagcgatgcgtcaattggttgagacaggctggatg
cacaacaggctcagaatggtggtggcaagcttcctaaccaaacacctactgattgactgg
cgttggggcgagcgattctttatgtcgcaccttatcgatggtgatttcagcgcgaataat
ggcggttggcaatgggcttcaagtactggctgtgatgctcaaccctactttcgaattttc
aatccgatcacccagagtgaaaagtttgatccgaaaggaatttttattcgtaagtacata
ccagagctgcaaaatattcctgacaagcatgtgcattttccacatgattacattgcaaaa
aacggaattaacagcgaatactggcaacccatcgttgaacacaaagaagcacgattgaga
gccttagcctttttcaaataa
DBGET
integrated database retrieval system
