Vulpes lagopus (Arctic fox): 121471842
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Entry
121471842 CDS
T07435
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04141
Protein processing in endoplasmic reticulum
vlg04210
Apoptosis
vlg04217
Necroptosis
vlg04218
Cellular senescence
vlg04382
Cornified envelope formation
vlg05010
Alzheimer disease
vlg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121471842 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121471842 (CAPN1)
04217 Necroptosis
121471842 (CAPN1)
04218 Cellular senescence
121471842 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121471842 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
121471842 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
121471842 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vlg01002
]
121471842 (CAPN1)
Enzymes [BR:
vlg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
121471842 (CAPN1)
Peptidases and inhibitors [BR:
vlg01002
]
Cysteine peptidases
Family C2: calpain family
121471842 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
121471842
NCBI-ProteinID:
XP_041578633
LinkDB
All DBs
Position
11:complement(75640415..75667154)
Genome browser
AA seq
715 aa
AA seq
DB search
MAEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYMGQDFEQLRAHCLQSGALFRDEA
FPPIPQSLGYKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPIKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK
ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYQGQMVSLIRMRNPWGE
VEWTGAWSDGSSEWNNVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
RSIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDVDDDYGGRESGCSF
VLALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANSSRARSEQFIN
LREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTEELDDQIQANLPDEQVLS
EEEIDENFKALFRQLAGEDMEISVKELQTILNRIISKHKDLRTKGFSLESCRSMVNLMDR
DGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELI
ITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagatcatcaccccagtgtactgcactggggtgtctgcacaagtgcagaag
cagcgggccaaggagctgggccttggccgccatgagaacgccatcaagtacatgggccag
gactttgagcagctgcgagcacactgcctgcagagtggggccctcttccgtgatgaggcc
ttcccccccataccccagagcctaggctacaaggacctgggccctaactcctccaaaacc
tatggcatcaagtggaagcgtcccacggagctgctctcaaacccccagttcattgtggat
ggagccacccgcacagacatctgccagggagcactgggggactgttggcttctggctgcc
atagcctccctcaccctcaatgacacgcttctgcatcgagtggttccacacggccaaagc
ttccagaatggctatgctggcatcttccatttccagctgtggcagtttggggaatgggtg
gatgtggtcgtggatgacctgctgcccatcaaggacgggaagctggtgtttgtgcactcc
gcccaaggcaacgagttctggagtgccctgcttgagaaggcctatgccaaggtgaatggc
agctacgaggccctctctggaggcagcacctcagagggctttgaggacttcacaggcggg
gtgacagaatggtatgagctgcgcaaggcacccagcgacctctaccaaatcatcctcaag
gccctggagcgaggttctctcctgggctgctccattgacatctccagcgttctagacatg
gaggccatcactttcaagaagctggtgaagggccatgcctactctgtgacaggggccaag
caggtgaactaccagggccagatggtgagcctgatccggatgcggaatccttggggcgag
gtggagtggacaggagcctggagtgacggctcctcagagtggaacaacgtggacccttac
gaaagggagcagctccgggtcaagatggaggatggagagttctggatgtccttccgagac
ttcatgcgtgagttcacccggttggagatctgcaacctgacacccgatgcgctcaagagc
cggtccatccgcaaatggaacaccacactctacgagggcacctggcggcgggggagcacc
gcggggggctgccggaactacccagccaccttctgggtcaatccccagttcaagatccgg
ctggaggagacagatgatgtggacgacgactacgggggtcgcgaatcaggctgcagcttc
gtgctagccctcatgcagaagcaccgccgccgcgaacgccgctttggccgcgacatggag
accattggcttcgcggtatacgaggtccctccggagctggtgggccagcccgctgtgcac
ctgaagcgcgacttctttctggctaattcgtcccgggcacgttcggagcagttcatcaac
ctgcgggaggtcagcacccgcttccgcttgccacccggggagtacgtggtggtcccctcc
acctttgagcccaacaaggagggtgactttgtgctgcgcttcttctcggagaagagcgcc
gggacggaggagctggacgaccagatccaggccaatctccctgatgagcaagtgctctca
gaagaagagattgatgagaacttcaaggccctcttcaggcaactggcaggggaggacatg
gagatcagcgtcaaggagctgcagaccatccttaacaggatcatcagcaagcacaaggac
ctacgtaccaagggcttcagcctggagtcatgccgcagcatggtgaacctcatggacagg
gatggcaatgggaagctgggcctggtggagttcaacatcctgtggaaccgcatccggaat
tacctgtccatcttccggaagtttgacttggacaagtcgggcagcatgagtgcctacgag
atgcggatggccattgagtctgcaggcttcaagctcaacaagaagctgtatgagctcatt
atcacccgctactctgagccagacctggctgtggactttgacaactttgtgtgctgccta
gtacgcctggagaccatgttccggtttttcaaaactctggacacagatctggatggagtg
gtgacttttgatttgtttaagtggttacagctgaccatgtttgcatga
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integrated database retrieval system
