Vulpes lagopus (Arctic fox): 121472529
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Entry
121472529 CDS
T07435
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04082
Neuroactive ligand signaling
vlg04721
Synaptic vesicle cycle
vlg04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121472529 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
121472529 (SLC6A4)
04721 Synaptic vesicle cycle
121472529 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vlg02000
]
121472529 (SLC6A4)
Transporters [BR:
vlg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121472529 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
121472529
NCBI-ProteinID:
XP_041579644
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Position
12:17208065..17232417
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AA seq
630 aa
AA seq
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METTALNSQKELSACKDKEDCQENGVLQQGVPVPEDKVEAGQISSGYSAVPSPGAGDDPQ
HSIPAATTALVAEVHQGEREAWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSGDNITWTPHSTSPAEEFYMRHVLQLH
RSNGLQDLGGISWQLTLCIMLIFAVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLCVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYITYRLVTT
PGTFKERIIRGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacagccttaaattcccagaaggagctatcagcatgtaaagataaagaagac
tgtcaggaaaatggagttctacagcagggtgtccctgtccccgaggataaggtggaggct
ggccaaatctccagtgggtactcagcagttccaagccctggtgcaggagacgaccctcag
cactccattccggctgccaccacagccctagtggccgaagttcatcaaggggaacgagag
gcctggggcaagaagatggatttcctcctgtcggtcattggctacgctgtggacctgggc
aacgtctggcgcttcccctacatatgttaccagaatggagggggggcattcctcctcccc
tacactatcatggccatttttggggggatcccgctgttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttcaatatggaggaaaatctgcccgattttcaaaggg
atcggttatgccatctgcatcattgccttctacattgcctcctactacaacaccatcatg
gcctgggcactctactacctcatttcgtccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctccggggacaacatcacctgg
acgccccactcaacgtcccctgcagaagaattttacatgcgccacgtcctgcagctccat
cggtctaatggacttcaggacctgggcggcatcagctggcagctcaccctctgcatcatg
ctgatcttcgctgttatctacttcagtatctggaaaggtgtcaaaacatctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggtcctggc
tttggggttttactggcttttgctagctacaacaaattcaacaacaattgttaccaagac
gccctggtgaccagtgtggtgaactgtatgacgagcttcgtgtcaggatttgtcatcttc
acagtgctcggatatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccagcatcc
acattctttgctatcatcttcttcctgatgttgatcacactgggcctggacagcactttt
gcaggcttggagggggtgatcacagctgtgctagatgagtttccacacatctggtccaag
cgccgggagtggtttgtgctttgtgtggtcattacctgcttctttggatccctggtcacc
ctgacctttggcggggcatacgtggtgaaactgctggaggagtatgccacagggcccgca
gtgctcaccgttgcacttatagaggcagttgccgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctggatggttctggaggatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgtagttttttgatgagtccg
ccacagctacgacttttccaatataattatccgcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacttatcggctggtcaccact
ccagggacatttaaagagcgtattattagaggcattactccagaaactgcgacagaaatt
ccctatggggacatccatttgaatgccatataa
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