Vulpes lagopus (Arctic fox): 121472555
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Entry
121472555 CDS
T07435
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121472555 (HELZ)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
121472555 (HELZ)
3'-5' decay
Other 3'-5' decay factors
121472555 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
zf-CCCH_4
Mov-10_helical
nSTAND_NTPase5
AAA_22
AAA_7
Bac_DnaA
AAA_16
AAA_14
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
121472555
NCBI-ProteinID:
XP_041579695
LinkDB
All DBs
Position
12:47531748..47691566
Genome browser
AA seq
1945 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMTLKHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQPVSNILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEDLEGGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDIQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDTTMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNTNKLQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRILTHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKEQHEPSRNGKSDTNNPGPEINKIRTPEKKPTESKQIDLESNPQNRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHAL
LNQQQSNLPEQPNQMPPQPNQVVPPQNPLNQLTQQPPPQLSPAYQAGPNSAFFNSAVSHR
PQSPPAEPVIPEQQPPPMLQEGHSPLRAITQPGPLLPSHLNNFTDENPPGLPIGEALDRM
HGNVALETLRQQQVRLQQWNEHHAYLSQGSIPYPHHHHPHPHLQHLPQPPIGLHQPPVRA
DWKLPSSAEDEAETTDSRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQIQTRSPPA
VPSPPSSTDHSSHFSNFNDNSRDIEVANNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYL
APDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTV
SSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHNNPSSFN
FSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIVPSKTVKPPEDQLKSENLEVSSSFNY
NVLQHLGQFPPLMPNKQIVESANSSSQQSSGGSKPAMSYASALRAPPKPRPQPEQAKKSS
DPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgtgaatcacttaagaggcag
gactatgaaatgaccctcaagcattgcacagaggccctcctttctcttggccagtactcc
atggccgatttcacagggccatgtccactggagatagaaagcatcaaaattgagagtctt
ctttacagaattgcctcatttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggagaaggcctggccaagggagatggggcctttcaggcagtgctttgc
tgcatgcagctgaaaggaaaactccaacctgtgtccaacattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactaaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctctctggatatcacgtggaagacttggaaggg
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacgcttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaagtagagcataatcctgatctgtcggttactgtcaacaccaaaaaatctcaccagaca
tggacctttgctcttacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgtttacccagtctgttttagacaaatcattgaccaagaccaactatcagtcacggctg
catgaccttctttatatcgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcagttgcagattctagcaagtttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacatacaggttgaacttcagtttcagttaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttgtttccagacacc
actatgactccaaccataccttggagtcccaacagacaatgggatgaacagctggatcct
cggctaaatgcaaaacagaaagaggctgttctggccattacaactccactttcaatacag
ctgcctcctgtcctcatcattggaccctatgggacaggcaaaacgttcactctagctcag
gccgtcaagcacatactccagcagcaagagacgagcaggatcctcatttgcacccattct
aatagtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggttgttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggcc
atggagtgtgaaacaattatgcctctagcattagcaactaaaaacactcggattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtttcattacttgatcgactctatgagcattaccctgctgagtttccatgtaga
attctcctatgtgagaactaccgctcccatgaagctatcatcaattacacctctgagctc
ttctatgagggcaaactgatggcaagtggaaaacaaccagcacacaaggatttctaccca
ctaactttctttacagcacgaggggaagatgtacaagaaaaaaatagcacagctttttat
aacaatgcagaggtattcgaagtggtggaacgagtagaagagttgagaaggaagtggcca
gtagcatgggggaagttggatgatggcagtattggtgtggtgactccatatgctgatcaa
gtgtttaggatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaaacaattcagagttctatttcttagtacagtacgtacaagg
catacttgtaaacataaacagacaccaattaaaaagaaagagcaactgctggaagattct
acagaggatttagattatggttttttatcgaactataaacttctaaacactgccatcaca
agagcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggagcgatttattgccctgtgtcatgacaataatagcctacacgga
atcacttttgaacagatcaaagctcagctagaggctttagaactcaagaagacatatgtg
ttgaatccactggcacctgaatttattccccgggctctaagactgcagcattcaggaaat
accaacaaacttcagcagtcaccccccaaggggaaaagcctccatcatacccagaatgat
catttccagaatgatggaattgttcaacccaatccttctgtacttattggcaatcctatt
agagcatatactcctccaccccctcttggacctcacccaaatttggggaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacagggtaccagggcaga
tttgcagtcgatcctcggatccttacacaccaggcagcaatggcctacaatatgaacctc
ttacagacacacggacgggggtctcccataccatatggccttgggcaccacccacccgtc
agcatagggcagccacaaaaccagcatcaggagaaggagcaacatgagccaagtcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaaa
aagcctacagaatcaaaacagattgatttggaatcaaatccacagaacagaagtcctgag
tcgcgtcctggtgttgtttatcccaataccaaatttcatcgcaaagataatctcaacccg
agacacataaatcttcctctccctgctcctcatgcacagtatgcaattcccaatcgtcat
tttcatccccttccacagctacccagaccaccgtttccaattccgcagcagcacgccttg
ttaaatcagcagcagagtaatttgcctgaacaaccaaatcagatgccaccccaaccgaat
caggtagtcccaccacagaatccgttgaaccagctgactcagcagccacctcctcaactt
tctcctgcctatcaggcaggacccaacagtgctttctttaatagtgcagtttctcaccga
ccacagtcccctcctgcagagcctgtgattcctgagcagcagccccctcccatgctgcaa
gaaggccacagtcctctgcgagccatcacgcagcctggccccctccttccttcacatctg
aataacttcactgatgagaaccccccaggattgcctataggggaggctttagatcgtatg
cacgggaatgttgctctagaaacactaagacagcagcaagtgcggttacagcagtggaat
gagcatcacgcctatctcagtcagggcagtattccatacccacaccatcaccatcctcat
cctcacctccagcatcttcctcagccacccatcggattacatcagccaccagtgagagca
gactggaagctccccagcagtgctgaagatgaagcagaaacaacagactcaaggtttcaa
gacttaatcagagaactatctaatcgtgatcaaagtgaaacacgggaactagctgaaatg
ccaccacctcaatcaagacttttgcaatatagacaaattcagactaggagcccaccagca
gtcccatctcccccatccagcacagaccacagtagccacttttctaactttaatgacaac
agcagagacattgaagtagccaacaacccagcatttccacagcgcctaccgccccagata
ttcagctcgcctttctcgttgccatctgaacaccttgcccctcctcccttgaaatacctg
gcacctgatggagcatggacttttgctaacttacaacagaatcacctaatggggccaggt
tttccctatggcctacctcccttgcctcacaggccaccgcagaacccttttgtacaaata
cagaatcatcaacatgctattggtcaagagccatttcacccattgtcatctcgaacagta
tcttcttcttcgctccctagcttagaagagtatgaacccagaggacctggtcggcccttg
taccaaagaagaatctcatctagctcagtccagccttgttctgaagaagtaagcactcct
caagacagtcttgctcagtgtaaagaacttcaggaccataataacccatcttctttcaac
ttttcatccccggagtcctgggtaaacaccacctcatctaccccctatcagaacattccg
tgtaatggatccagcaggaccgctcagcccagagagttgatagttccatctaagaccgtc
aaaccccctgaggatcagctgaagtctgagaacctcgaggtgtccagttccttcaactat
aatgtgctgcagcatctcggccagtttccccctctcatgcccaacaagcagatcgtggag
tcggccaacagcagtagccagcagagctctgggggcagcaagcccgccatgtcctatgcc
agcgctttgcgggcccctcccaagcccaggccccagcctgagcaggccaagaagagtagc
gaccctctgtctctgttccaggaacttagcctggggagctcatcaggcagcaatggcttt
tactcatattttaaataa
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integrated database retrieval system
