Vulpes lagopus (Arctic fox): 121472930
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Entry
121472930 CDS
T07435
Symbol
ABCA8
Name
(RefSeq) ABC-type organic anion transporter ABCA8 isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121472930 (ABCA8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vlg02000
]
121472930 (ABCA8)
Transporters [BR:
vlg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
121472930 (ABCA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
MMR_HSR1
AAA_25
AAA_23
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121472930
NCBI-ProteinID:
XP_041580534
LinkDB
All DBs
Position
12:complement(49694855..49768889)
Genome browser
AA seq
1622 aa
AA seq
DB search
MTKRQISVCQQTWALFCKNLLKKWRMRRESFMEWFNPLLLLLCLYLFPTNHKVNDFSSLP
DMDLGPVDSFKDSLFSIVYTPITNTTQQIMDKVALASFMKDKKVLGLSNEESIKEVMTHY
PEEIIQVIFTNTFSYHLKFTLGHRIPTRKEHRDHEAHCYNLSEGVKCQVSKYWKQGFVAL
QAAINAAIIETTTNHSVMEELMSVTGKNMKIHPFISQGGIIADFFIFFCIISFSSFTYYA
SINVTRERKKMKVLMKMMGLRDSAFWLSWGLLYAVFIFIMALFLALIIKSVQFVILTGFM
AIFTLFFLYGLSLIALAFLMSVLVKKSFLTGLIVFLLTIFWGSLGFTALYRHLPTSLEWI
LSFLSPFAFSLGMAQLLHLDYDLNSNAFPYPSDDSKLIIATNFMLAFDLFFYVALTIYFE
KILPNEHGHEYPPLFFLKPSFWSRQHKADHVALEDEIDSNPSSNDSFEPMPPEFHGKEAI
RIRNVTKEYKGKPDKIEALKDLVFDIYEGQITAILGHSGAGKSTLLNILSGLSVPTKGSV
TIYNNKLSEITDLENISQLTGICPQSNVQFDFLTVKENLRLFAKIKGIRPHELDKEIQRI
LLELEMKNIQDVLAQNLSGGQKRKLSFATAILGDPQVFLLDEPTAGLDPFSRHQVWNLLR
ERKADRVILFSTQFMDEADILADRKVFLSSGKLKCAGSSLFLKKKWGIGYHLSLQLNEMH
VQENITSLIKQHIPDAKLSAESEGKLVYTLPLERTNRFPALYEDLDRCPGLGIENYGVSM
TTLNEVFLKLEGKPAIDESDFAMLGEAQAERTGDTERLVETEQVLSSLNEMRTTLGGMAL
WRQQICTIARVRFLKLKHERKVFLSLFLILGIGICPLLLENIIMRIYEMSYTWELSPHLY
FLAPGQQPRDPLTQLLIINKTGTSIDDFIHSVEHQNIALEVDVFGTKNGLDDPSYNGAIT
VSGNTKNYSFSLACNTKRLNCFPVLMDIISNALLGMITPSAHIQTDRSTFSSERESNPFE
FPGYTIFWLILASSCAPYIAMGSIDDYKNKIQSQLRISGLFPSAYWFGQALVDVPMYCLV
FLLMYLIDYSLNLQEPFFEIISQIIQIPCAVGYSTSLIFLTYVISFIFRKGKRNSGIWSF
GFCMITAISVFILLFDYHGHVTLYCLIFLVPQATLIGCMVFYFLQPMAYYTTQEPRSVGP
FLLFLIPFLHFIIFLFTIRCLEWKYGKKSMRRDPFFRISPRSNDVCQNPEVLEGEDEDVQ
MERMRTADALNSTNSDEKPVIIASCLRKEYSGKRKYCSSKRKKKIATRNVSFCVRKGEVL
GLLGHNGAGKSTSVQVITGDTKPTAGQVLLKGSSGDSSLGFLGYCPQENVLWPNLTVKEH
LEVFAAVKGLKKADAAVTISRLADVLKLQDQLKLSVKTLSEGIKRKLCFALSILGNPSVV
LLDEPSTGMDPEGQQQMWQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGKLRCI
GSIQHLKSKFGKNYYLEMKVKTPEQRESLHQEILRAFPQAAQQKRYSPVMVYKLPMEDVR
PLAQAFFTLERVKQSFDLEEYSLSQSTLEQVFLEISKEQELDDFDEEPDLSVKWKLLPQE
DP
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagacagataagtgtttgtcaacagacctgggcattattttgcaagaacctt
ctgaaaaaatggaggatgagaagagagtcctttatggaatggttcaacccattgctcctc
ctactttgtttgtatctatttcctactaatcataaagttaatgatttttcttcactgcct
gacatggacctgggaccagtagactcgtttaaagattctttgttttctattgtatacaca
cctatcaccaatacaacccaacagataatggataaagtagccttagcctccttcatgaaa
gataaaaaagttttgggactgtccaatgaagaaagtattaaagaagtaatgacacattat
cctgaggaaataatacaagtcatctttactaatacattctcatatcatttgaaattcacg
ctaggccacagaatcccaacaaggaaggaacacagagaccatgaagcccattgttataat
ctgagtgaaggtgttaagtgccaggtttcaaaatactggaagcaaggttttgtggctctt
caagctgctatcaatgctgctattatagaaaccacaacaaatcactcagtgatggaggaa
ttgatgtcagttactgggaaaaatatgaagatacatcccttcattagtcaaggaggcatt
atagctgatttcttcattttcttctgcatcatttccttttcctcattcacttattatgca
tctattaacgttacaagagagaggaagaagatgaaagttctgatgaagatgatgggtctt
cgagattcagcgttctggctctcctggggtttgctctatgctgttttcatcttcattatg
gcacttttcttggcacttattattaaatctgtccagtttgtcattctgactggcttcatg
gcgatcttcaccctctttttcctctatggattgtctttgatagctttggcttttctaatg
agcgtcttggtaaagaaatctttcctcactggcctgatcgtgttccttcttaccatcttt
tgggggagtttgggatttacagcgttgtacaggcatcttcctacatccttggagtggatt
ttaagttttcttagcccctttgccttcagcctcggaatggcccagcttttgcacttggac
tatgatttgaattctaatgcatttccttatccatcggacgactcaaaactgataatagca
acaaatttcatgttggcttttgatcttttcttctatgtggcattgacgatttattttgag
aaaattttgccaaatgaacatggacatgaatatccccccttgtttttcctgaagccctcc
ttttggtctcggcaacataaagctgatcatgtggccctcgaagatgaaattgattccaat
ccttcatctaatgactcttttgaaccaatgcctccagaattccatggaaaagaagccatc
agaattagaaatgttacaaaagaatataaaggaaagcctgataaaatagaagctttgaaa
gatctggtatttgacatatatgaaggccaaatcactgcaatacttggtcacagtggtgct
ggaaaatcaacactgttaaacattcttagcgggctatctgttcccaccaaaggttcagtc
accatttataacaataaactttcagaaataactgatctggagaatatcagccagctcact
ggaatttgtccacaatccaatgtacagtttgacttcctcactgtgaaagaaaatctcagg
ctctttgctaaaataaaaggaattcgaccacatgaactggacaaagagatacaaagaatt
ttactggaattggagatgaaaaatattcaggatgtcctggctcagaacttaagtggtgga
cagaaaaggaaactcagctttgcaactgccattttaggagatcctcaggttttcctgtta
gatgaaccaactgctggactggatcccttttcaaggcaccaggtttggaacctcctgagg
gagcggaaagcagaccgtgtgatcctcttcagtacccagttcatggatgaggctgacatc
ctggctgataggaaagtgtttctctccagcgggaagctgaagtgtgcaggttcttctcta
tttttaaagaagaagtggggcattggatatcacttaagtttgcagttgaatgaaatgcat
gttcaggaaaatataacatcacttattaaacagcacatccctgatgccaaattatcagca
gaaagtgaaggaaaacttgtctacacattgcccttagaaagaacaaatagatttccagca
ctttatgaggatctggatagatgtcctggcctgggaattgagaattacggtgtttccatg
acaactttgaatgaagtgttcctgaaactagaaggaaaaccagctattgatgaatcagat
tttgccatgttgggagaagcacaggcagaaagaaccggagacacggagaggcttgttgag
acagaacaagttctcagttcacttaatgaaatgagaacgacattaggtggcatggctctc
tggagacagcagatctgcacaattgcaagggttcgcttcttgaaattaaagcatgaaaga
aaagttttcttatcacttttcttgattctaggaattggaatttgcccccttcttttggag
aatatcatcatgagaatttatgaaatgagctacacttgggaactttctcctcatttatac
ttccttgctcctggacaacaaccacgtgatcctctcactcaactattgatcatcaataaa
acagggacaagcattgatgactttatacattctgtggagcatcagaacatagctttggaa
gtagatgtatttggaactaaaaatggcctggatgacccatcttataatggagccatcaca
gtatctggtaatacaaagaattacagtttttcattagcgtgcaataccaaaagactaaat
tgcttcccagttcttatggatatcattagtaatgcgctacttggaatgattacaccatca
gcacatatccaaactgacagaagtacattttcaagtgagagagagagtaatccatttgaa
ttcccaggatataccatattctggttgattctggcatcatcttgtgctccttatattgcc
atgggcagcattgatgattataagaacaaaattcagtcccagctacggatttcgggcctc
ttcccttctgcttactggtttgggcaggcactggtggatgttccaatgtactgcttggtc
ttccttcttatgtatttaatagactacagcttaaatctccaagagcctttctttgaaatt
ataagtcagattatacaaatcccatgtgctgttggctattccacctcacttatcttcttg
acatatgtgatttcattcatttttcgcaaggggaaacgaaatagtggcatttggtctttt
ggcttctgtatgatcaccgccatctctgtgtttatactgctatttgactaccatggacat
gtcacactatactgcctcatctttttagtaccacaagccacattaattggctgtatggtc
ttctattttcttcaacccatggcttattacacaactcaggaaccaagaagtgtaggacca
tttctgttattcttaattcctttccttcattttatcatcttcctttttactattcgatgt
ctggaatggaagtatggaaagaaatcaatgaggagggatcccttcttcagaatttctcca
agaagcaatgatgtgtgtcaaaatccagaagtgctagaaggagaggatgaagatgttcaa
atggaaagaatgagaacagcagatgccttgaattctacaaactctgatgagaaaccagtc
attattgccagctgtctacgcaaagagtattcaggaaagagaaaatactgctcttccaag
aggaagaagaaaatagccacaagaaatgtctctttctgcgttagaaaaggtgaggtttta
ggattattaggacacaacggagctggtaaaagtacatccgttcaggtgataactggagac
acaaaaccaactgctggacaggtgctactaaaagggagcagcggggacagctccctgggc
ttcctgggttactgtccccaggagaatgtgctgtggcccaacctgactgtgaaggaacac
ctggaggtgtttgctgctgtaaaagggctgaagaaggcagacgcggcagtcaccatctcc
aggttggcagatgtgctcaagctgcaggaccagctgaagctgtccgtgaagaccttatcc
gagggaataaagaggaagctgtgcttcgcactgagcatcctgggaaacccatccgtggtg
cttctggacgagccatccacgggcatggaccctgaggggcagcagcaaatgtggcaggcg
atccgggccacctttaaaaacacagagaggggcgccctcttgaccacccactacatggca
gaggccgaggccgtgtgtgaccgtgtggccatcatggtgtctggaaagctgagatgtatc
ggttccatccaacacctgaagagtaaatttggcaagaattactacctggagatgaaggtg
aagacccctgagcaaagggaaagtctccatcaggaaattctgagggctttcccccaggcg
gctcagcagaaaaggtactctcctgtgatggtctataaactgccaatggaagacgtacga
cctttagcgcaagctttcttcacattagagagggttaaacagagcttcgatttggaggag
tacagcctctcccagtccaccctggagcaggttttcctggagatctccaaggagcaggag
ctggatgacttcgatgaagaacctgacctttcagtgaagtggaagctcctcccacaggaa
gacccttga
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integrated database retrieval system
