Vulpes lagopus (Arctic fox): 121473009
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Entry
121473009 CDS
T07435
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121473009 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vlg02000
]
121473009 (ABCA6)
Transporters [BR:
vlg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
121473009 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_15
nSTAND1
AAA_29
AAA_22
AAA_23
Endonuc-BsobI
MMR_HSR1
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121473009
NCBI-ProteinID:
XP_041580770
LinkDB
All DBs
Position
12:complement(49868049..49929321)
Genome browser
AA seq
1619 aa
AA seq
DB search
MHTKQKSVYQQTQALLCKNFLQKWRMKRESLLEWGLPILLGLYMGLFSHFRENIYFPELP
PQDLGRADNISNSIDIVYTPISDLTQQIMNKTSFAPFLKERRVIGVPNQKSMDKILVDNT
SEVIGIIFHDTFSYKLKFLQGYHIPFLEEDPSTAHCWNRYGEFSCSLAKYWSSGFVTLQT
AIDASIIQITTNHSVMEELMSVTGINMKTLPFIYKNILQKELFIFYCLFNFLPFIYFLTL
NATKERKKCQDMMKMMGLQKSAFWISCGLIYAGFIFIVSIMMTVIITVTQIIVMTGFMVI
FTLIFLYGLSLIALTFLMSVLLKKTVLTNLVMLFLNVFCGTIGFGVYYRQLPSSLEWILS
ICSPFAFTAGMNKIIYFDNAMSGVILPYSSGDSYVMIGTFFILAFDALFYLALALYFEKV
LPYGNEHRSSPLFFLKLPCFQHQRTNNKVIEKEIDPEHPSDDYFEPVAPEFQGKEVIRIR
NVKKEYTGKTGKMKALKDLTLDIYEGQITAILGHSGAGKSSLLNILNGSSAPTEGSVTIY
NKNLSEMQDLEEIRKITGVCPQFNVQFDMLTVKENLRLFAKIKGIQPHEVEQEVQRILLE
LNIQNIQDNLATHLTEGQKRKLTFGIAILGDPQILLLDEPTAGLDPFSRHRVWNFLKERK
AGHVILLSTNLMDEADILADRKVIMSNGRLKCAGSSVFLKRKWGLGYYLSLYRNEVCDPE
KITSFVNHHIPDAKLKTENKEKLVYILPMERTNKFPELFSDLDKCSGQGVMSYDISVSTL
NDVFMKLEGKSTIEQDFEQAEMVRDTESLHEIEPACSSIPETQKAVSDMGLWKMQICAIA
RLRFLKLKRGREELLTLLLVFGVAMFPLIAEKIINVLLIQKIDWKFKPEVYFLSPGQPPK
DLRTSLLIINNTDSNIEDFIQSVKHQNILLEVDDFANRNGTADLSYNGAIIVSGKQKDYR
FSVLCNTLRLHCFPVLVNIVSNGLLRMLNGTQNIQIERSPYPFDDEIFSTGLPEGFTFLF
WIVCSISPYFSMSSISDYKKRAKSQLWISGLYPSAYWFGQAVVDISFFVFFLFSMLLFLY
VASLMEIYITSGIVFALVIFMLGYAASLVFLTYVISFIFRKTRKSSGLWSFCIYITSIII
FDIVLMHFDLPVLISSMILVPFTTMGGFLVFLAQRTYELEYLNHRYDPSGVDFLVCLIPY
LQALIFVFILRCMETKCGKKIMRKDPIFRISPQSGSAGPNPEEPVDEDEDVKAERLRAAT
ALTTSQADEKPVIIASCLHKEYAGQKKSCFSKRKKKIATRNLSLCVKKGEILGLLGPNGA
GKSSSIRMISGITKPTAGEVEVKGCRSGHQGDSLVNFLGYCPQENVLWPNLTVREHLEVF
AAVKGLRKGDATMAISRLVDYFKLHDQLNVQAKKLTAGATRKLCFVLSILGNSPILLLDE
PSTGLDPAGQQQMWQTIQAAVKNTEKGALLTTHYLAEVEAICDRIAIMVSGRLRCIGSTQ
HLKNKLGKDYILELKVKEMSQVTSVHNEILKLFPQAAQQERYSSLLVYKLPLADVYPLSQ
AFRKLEAVKHDFNLEEYSLSQCTLEKIFLELSKEQEVGNFEEEIDTTMRWALLSPSDDI
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaaaacagaaaagtgtgtatcagcaaactcaagcacttctgtgcaagaatttt
cttcagaaatggagaatgaaaagagagagcttattggaatgggggctcccaatacttctg
ggactgtacatgggactgttttcacacttcagagaaaacatatattttcctgaactgcct
cctcaagatctgggaagggcagataacattagtaactctatagatattgtatatacacct
atctctgatctaacccagcaaataatgaataaaacatcatttgctccctttttgaaagaa
agaagggtcattggagtacccaatcaaaaatccatggataaaatacttgtagacaatacc
tcagaagtcattggaatcatctttcatgacactttctcttataaattaaaatttttacag
ggatatcacattccatttttggaggaagatccttccacagctcattgttggaatcggtat
ggtgagttttcctgttctctggccaaatactggagtagtggatttgtgactctacaaact
gcaattgatgcttctattatacagatcacaacaaatcactctgtgatggaggagttgatg
tcagttactggtataaatatgaagactttaccttttatttataaaaacattcttcaaaag
gaactctttattttctactgcctgtttaactttcttccatttatatattttctaacactt
aatgccacaaaagagagaaaaaagtgccaggatatgatgaaaatgatgggtctgcaaaag
tcagccttctggatctcctgcggtttaatctatgctggtttcatcttcattgtttccata
atgatgacagttatcataacagttacccaaattatagtcatgacaggcttcatggtcata
tttacactcattttcttatatggtttatctttgatagctttaacattcctgatgagcgtg
ttgttaaagaagactgtcctcaccaatttggtgatgcttttcctcaatgtgttttgtggg
actataggattcggtgtgtattatagacaacttccttcctctttggagtggattttgagt
atttgcagcccctttgccttcactgctgggatgaataagattatctacttcgataatgct
atgagtggtgtcattttaccttactcttcaggagattcatatgtaatgattggaactttt
ttcatattggcttttgatgcacttttctacttggccttggcattatactttgaaaaagtc
ttaccctatggaaatgagcaccgttcttctccattatttttcctgaaattaccttgtttc
caacatcagaggactaataataaggtcattgagaaagaaatagatcccgaacatccctct
gatgattatttcgaaccagtagctccagaattccaaggaaaagaagtcatcagaatcaga
aatgttaagaaagaatatacgggaaagactgggaaaatgaaagcattgaaagacttgact
ttggacatttatgaaggtcaaatcacagcaattctgggtcatagtggagctggcaaatct
tcattgctgaacatccttaatgggtcatctgctccaacagaaggatcagttactatctat
aataaaaatctctctgaaatgcaagacttggaggaaatcagaaagataactggtgtttgt
cctcaattcaatgttcaatttgacatgctcaccgtgaaggaaaacctcaggctgtttgct
aaaataaaaggaattcagccgcacgaagtggaacaagaggtacaaagaattttattagaa
ttgaatatacaaaacattcaggataatcttgctacacatttaactgaaggacagaaaaga
aagctgacctttgggattgccattttaggagatcctcaaattttgctattagatgaacca
actgccggcttggatcccttttcaaggcatcgagtatggaacttcctcaaggaacgcaaa
gcaggccacgtaatcctcttgagtaccaatctcatggatgaggctgacatcctggctgat
aggaaagtgatcatgtccaatgggagactgaagtgtgcagggtcttctgtctttttgaag
agaaaatggggtcttggatattacttaagtttgtacagaaatgaagtatgtgatccagaa
aaaataacatcctttgttaatcatcacatccctgatgctaaattaaaaacagaaaacaaa
gaaaaacttgtatatattttgcccatggaaaggacaaataaatttccagagcttttcagt
gatcttgataagtgttctggccagggtgtgatgagttatgacatttccgtgtcaactctg
aatgacgtcttcatgaaactggaaggcaaatcaaccatcgaacaagattttgaacaagca
gagatggtaagagacacagaaagcctacatgaaatagagccagcttgctcttctattcct
gaaacgcagaaggctgtgagtgacatgggcctctggaaaatgcagatctgcgcaatagca
cgactccgtttcttaaagttaaaacgtggaagggaagagcttttgaccctactgttggta
tttggagttgccatgttccctttgattgcggaaaagataattaatgttctattaattcaa
aagattgactggaaatttaaacccgaagtgtacttcctctctcctggacaacctcccaaa
gaccttcgtaccagcctattgatcatcaataacacagactcaaatattgaagattttata
cagtcagtgaagcatcaaaatatacttttggaagtagatgactttgcaaacagaaatggc
actgcagacctgtcatacaatggagctatcatagtttctggtaaacaaaaggattacaga
ttttcagttctgtgcaacaccttgagactgcattgctttcctgttctcgtgaatattgtt
agcaatgggctacttcgaatgcttaatggtacacaaaatattcaaattgagagaagtcca
tatccttttgatgatgagattttctcaactgggctgccggaaggtttcacattcttattt
tggattgtgtgcagcatttctccttacttctccatgagcagtatcagcgattacaaaaag
agagctaagtcccagctatggatctcaggcctctatccttctgcctactggtttgggcag
gcagtggtggatattagcttctttgttttttttctcttttcaatgcttttatttttgtat
gtagcaagcttaatggaaatttatatcacaagcggaattgtgtttgctttggttatattc
atgctcggttatgcagcttcacttgtcttcctaacatatgtgatatcctttatttttcgc
aagacgagaaaaagtagtggcctttggtcattttgcatctatattacctccatcatcata
tttgacattgtgctgatgcacttcgacttgcctgtcttgatttctagcatgatattagtt
cctttcactaccatgggtggatttctggtttttttggcacagagaacttacgagctagaa
tatctaaaccacagatatgacccaagtggagttgattttctagtatgcctaataccttac
ttgcaggctttgatatttgtttttatcctaagatgcatggaaacaaaatgtggaaagaaa
ataatgcgaaaggatcccattttcagaatttccccccaaagtggaagtgctgggcctaat
ccagaagaacctgttgatgaggatgaagatgttaaagcagaaagattaagagcagcaact
gccctgaccacttcacaagcagatgagaaacctgtcataattgctagctgtctacacaaa
gagtatgcaggtcagaagaaaagttgcttctcaaagaggaagaagaaaatagcaacaaga
aatctctctctgtgtgttaaaaaaggtgaaattttgggattgctaggacccaatggcgct
ggtaaaagttcatctattagaatgatttctgggatcacgaagccaacggctggagaggta
gaagtgaaaggatgtcgttcgggccatcagggagacagcctggtcaacttcctgggctac
tgtcctcaggagaacgtgctgtggcccaacctgacagtgagggaacatctggaggtgttc
gctgccgtcaaagggctgaggaaaggggacgccaccatggccatttcacgattggtggat
tatttcaaactgcatgaccagctcaatgttcaggcgaagaaattaacggcaggagccacc
agaaagttgtgttttgtgttgagcatcctgggaaattcgcctatcctgcttctggatgaa
ccatcaacaggcctggatccagcagggcagcagcaaatgtggcagacaatccaggcagcc
gttaaaaacacagagaaaggggccctcctaaccacccattacctggccgaagtcgaggcc
atatgtgaccgcatcgctatcatggtgtctggaaggctgaggtgcatcggctccacccaa
cacctgaaaaataaacttggcaaggactacattctagaactgaaagtgaaggaaatgtcc
caagtgacttcggttcacaacgagattctgaagcttttcccacaggccgcacagcaggaa
aggtattcttccctcttggtctataaactgcctttggcagatgtctaccctctatctcag
gccttccgcaaattagaggcagtgaaacatgactttaacctagaagagtacagcctctct
cagtgcacattggaaaagatatttttagaactttctaaagagcaagaggttggaaatttt
gaagaagaaattgatacaaccatgagatgggcactcctctctccttcagatgacatttaa
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integrated database retrieval system
