Vulpes lagopus (Arctic fox): 121473272
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Entry
121473272 CDS
T07435
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121473272 (SNAPC4)
03021 Transcription machinery [BR:
vlg03021
]
121473272 (SNAPC4)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
121473272 (SNAPC4)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
121473272 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
121473272
NCBI-ProteinID:
XP_041581328
LinkDB
All DBs
Position
12:complement(12235133..12255535)
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AA seq
1428 aa
AA seq
DB search
MDVDAQREKIAKEIAELERILDPSSSSIGVGVSESGLALDSDADSLPEEDSDAADSPVSE
EERWGEASNGEDDPKEKNLPEDPETCLQLNMVYQEVIQERLAEVSLLLAQNREQQEEIMS
DLAGSKGPKVKDGKSLPPNLYIGHFMKPYFKDRVTGVGPPANEETREKAAQGIKAFEELL
VTKWKNWEKALLRRSVVSDRLQRLLQPKLLNKAAELEIPRARTRQAEWSSSLTQLGQFRW
LEYLHQKQSRVTSEAERQVLEKQSREAETEAQDIRQLPEEALLGNRLDNHDWEKISNVNF
EGSRSAEEIRKFWQNFEHPSINKQEWSGQEVDQLKAIAAKHGHLQWQTIAKELGTNRSAF
QCLQKYQQHNKALKRKEWTREEDRLLTQLVQEMRVGSHIPYRRIVYYMEGRDSMQLIYRW
TKSLDPSLKKGFWAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSDAQCRDRYLRRLHFSL
KKGRWNASEEEKLVELIEKYGVGHWAKIASELPHRTGSQCLSKWKIMVRKKQSRGRRRRR
PLRRVRWSSSSGDTSSEDISGEGGSGNSEDSEPEEAPETGAGGQAPPSTQHTVPDMDLWV
PARQSASEPCGGGARGWPGHHASPSSPPQGSSKAQDGSGAIHPTASAPTEEVGRVHTPSG
THSTSAGGIGHPDLVDTHPLSSEEPANKEKLRQSCLLSSSLGASPGDSSVARPRVRQLWH
RTTGNRRRWRGQALQRRLLEYQLLMAMSSWVGDVLPCTSQRPATVHTQADGLRKQLQDAQ
LTSTPVFTLFIQLFQIDTTGCMEVVRERKAQSSALLQTSAQDPGPGLLQMSSSTQNATGR
SFCSLPSREPAKQSTSHKGSRGWQPCRAKSSPQAPLPAPSGPRPKPKTVSELLREKRLRE
ARAQKATEGTVALPPLLLSSPLILQPSLPQTPHHPSTSGLAVTDMVLSGPGAPAVNGLRT
SAKDERPSTLPVVARTLASTEAVPAASRAPVLGPSQVSVNGHQDGLGQSQAPATSRKQGL
PEAPLFLPAAPSPTQLPVQPLSLTPALGMHKEGPHMVATTPLPVTWVLTAQGLLSVPAVV
GLQGPAGGTSDPKGLSVTLSPTLPGMQVGRGPRPSGLSHPWQPPANVDTDSDPPSRTDLL
TIPMLCQSQNSVEMGGDVAHASGGPAFPGEAQVAREIAMPRISSQATLLADHPEAKPCRS
SQPPMQAESGPGETPGSPRPGGLPGPLGLERPPPPRPRPERGALDLDLLSQESEAAVLEW
LRGKQGVCVPPLGSRLPYQPPALCSLRALSGLLLHKKTLEQRATSLMPSGAAEALQASLG
QVRRQLQDSPAYLLLKARFLAAFTLPALLATLSPHGVPTTLSVATRADPESEDDLGELEL
TCGPQAGPAATIPIQGAPDPGQSLDGCDSLDVRRTRHAWHARKRRRLV
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagatgctcaaagagagaagatagcaaaggagattgcagagcttgagaggatt
ttggatcccagttcctcgagcattggtgtgggtgtttccgagtctggtcttgctttggat
tctgatgcagattcactgccagaggaggactcggatgctgctgattcccctgtctcggaa
gaggagaggtggggtgaggccagcaatggtgaggacgaccccaaggagaagaacctccct
gaagacccagagacctgcctgcagttgaacatggtctaccaggaggtcatccaggagagg
ctggcggaggtcagcctcctgctggcccagaaccgggagcagcaggaagagatcatgagt
gacctggcagggtccaaaggccccaaggtgaaggacggcaagagcctgcctccgaacctg
tacatagggcacttcatgaagccctacttcaaggatagagtgactggagtggggcctcct
gccaacgaggagacacgagagaaggccgcccagggcatcaaggcttttgaggagctcctg
gtgactaagtggaaaaactgggagaaggctctactccgaaggtcagtggtgagcgaccgc
ctgcagcgcctgcttcagccgaagctgttgaacaaggcagctgagctcgagatcccgcgt
gcaagaaccaggcaggctgaatggtcgtcttcactcacgcagctcgggcagtttcgctgg
cttgagtacttgcaccagaaacagagtagggtgacaagcgaggcagagaggcaggtcctg
gagaagcagagcagggaggcggagacagaggcccaagacatccggcagctcccagaggag
gccttgctggggaacaggcttgacaaccacgactgggagaagatttccaacgttaacttt
gagggcagccgcagcgcagaggagatccggaaattctggcagaactttgagcacccaagc
atcaacaagcaggagtggagtgggcaggaggtggaccagctaaaggctatcgccgccaag
catggtcatctgcagtggcagacgattgccaaggagctagggaccaaccgcagtgccttc
cagtgcctgcaaaagtaccagcagcacaacaaggctctgaagcgcaaggaatggactcgg
gaggaggaccgcctgctcacccagctcgtccaggagatgcgtgtcggcagccacatcccc
taccggagaattgtctactacatggaagggagagattccatgcaactcatctatcggtgg
accaagagcttggaccccagcctgaagaaggggttctgggccccagaggaagatgcgaag
ttgcttcaagcagttgccaaatatggggagcaggattggtttaaaatccgggaagaggtg
ccaggtaggagcgatgcccagtgccgagatcggtatctcagacggctacacttcagcttg
aaaaaggggagatggaatgcaagcgaggaggagaagctggttgagctgatcgagaagtac
ggtgttggtcactgggcaaaaatagcttctgaactacctcatcggacgggctcccagtgt
ctgagcaagtggaagatcatggtcaggaagaagcagagtcgggggaggaggaggcggcgt
ccccttcgccgtgtgcggtggagctccagcagcggggacaccagcagtgaggacatcagt
ggcgagggcggcagcgggaacagcgaggactcagagccagaggaagccccggagactggg
gcaggtggccaggcaccaccgtccacacagcacactgtgccggacatggacctatgggtg
cctgccaggcagagtgccagtgagccatgtggagggggggcccggggctggccaggacac
catgcttcaccttccagccctccccaaggctccagcaaggctcaggatggcagcggggcc
attcaccccacagcctcggctcccacagaggaggtgggcagggtacacaccccctccggg
acccacagcaccagtgcaggaggcatcggccacccagacttggtggacactcatcccttg
agctcagaggagccagccaacaaggagaaactgagacagtcatgcctgctcagctcatcc
ctgggggccagccccggtgatagcagtgtggccaggccccgtgtacggcagctgtggcac
aggacaaccgggaacaggcggcggtggcggggacaggccctgcagaggaggctccttgag
taccagctcctgatggccatgagctcgtgggtgggtgatgtcctgccctgcacttcccag
aggcctgccacagtgcacactcaagccgatggcctcaggaagcagctgcaggatgcccag
ctgaccagcacccccgtgttcactctctttatccagctgttccagatcgacaccactggc
tgcatggaggttgttcgagagaggaaggcccagtcatctgccctgctccagactagtgct
caggacccagggcctgggctcctacagatgtcttcaagtacacagaacgccacaggccgc
agcttctgcagcctgccatcacgagagcctgcaaagcagagcaccagccacaaggggagc
aggggctggcagccctgccgtgccaagtccagtccacaggcgcccctgccagctccgagt
ggcccccggcccaagcccaagaccgtctccgagctgctccgggagaagcggcttcgggag
gcccgggcccagaaggccaccgagggcactgtggctctcccaccgctgctgctgtcctca
ccactgatcctccagcccagtctaccacagaccccccaccacccctccacctcgggcctg
gctgtcacagacatggtgctctctgggcctggagcccctgcagtgaatgggctgaggacg
tcagccaaggatgagcggccctccaccctgccagtcgtggcccgcaccctggcctccaca
gaggctgttcctgctgcctccagagctccggtgctgggccccagccaggtctccgtgaat
ggccatcaagatggtctgggacagtcccaggcccctgccacgtctcggaagcagggcctg
cctgaggcaccactctttctccctgcagcccccagccccactcagctgcctgtccagccc
ctcagcctgacgccagctctgggcatgcacaaggaggggccgcacatggtggctaccact
cctctgcctgtcacctgggtgctcacggctcaggggctgctctcagtgccagctgtggtg
ggccttcaaggcccagcgggggggacctctgaccccaagggactgtcagtgactctgtca
cccaccctgcctgggatgcaggtaggccggggccccaggccctctggactgagccaccct
tggcagcctccggccaacgtggacacagactcagatcctccctccaggacagatctcttg
accattccaatgctctgccagtcccaaaattctgtggaaatgggtggtgacgtggcccat
gcctctgggggacctgccttccctggagaggcacaagtggcccgggagatagctatgccc
aggatatcctcccaagccacactcctggctgaccaccctgaagcaaagccctgcagatcc
agccagccacccatgcaagctgagagtggcccaggagagacaccagggtccccaaggcca
gggggactcccggggcctctgggcctggagaggccacccccaccgcggcctaggcctgag
aggggtgccctagacctggacctcctgtcccaggagagcgaggcagctgtgctggagtgg
ctgcggggaaagcagggtgtgtgcgtgcctccactggggagcaggctaccctaccagcca
cctgccctgtgcagccttcgggccctgtctggactcttgctccacaagaagaccttagag
cagagagctacatcgctcatgcccagtggggcagctgaagccctgcaggcctcactggga
caggtgcggaggcagctccaggacagcccggcctacctgctgctgaaggcacggttcctg
gctgccttcaccctccctgcactcctggccaccctgtctccccatggtgtccccactacc
ctgtcagtggccacgagggctgaccctgagagtgaggatgacctgggggagctggagctc
acatgtggtcctcaggcaggaccagcagctaccatccctattcagggagccccagaccct
gggcaaagcctggacggttgtgacagccttgatgtgcgcagaacccggcatgcctggcat
gcccggaagaggcggcggctggtgtga
DBGET
integrated database retrieval system
