Vulpes lagopus (Arctic fox): 121473437
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Entry
121473437 CDS
T07435
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121473437 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vlg02000
]
121473437 (ABCA5)
Transporters [BR:
vlg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
121473437 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
121473437
NCBI-ProteinID:
XP_041581749
LinkDB
All DBs
Position
12:complement(50007724..50077738)
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AA seq
1642 aa
AA seq
DB search
MATAIREVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEE
VPDRELNPMDKSVLSNLILGYTPVTNITRNIMQKVSTDHLPEVIITEEYTNEKELLVSSL
SKPNNFVGVVFKDFMSYELRFFPDMIPVSSIYMDSRAGCSTSCEAAQYWSSGFTVLQASI
DAAIIQLKTNVSFWRELESTKAVIMGETAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSCVVIF
LLFFLYGLSSIFFALMLTPLFKKSKHVGIVEFLVTVAFGFVGLLIVLMESFPKSLVWLFS
PFCQCTFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITIVMLALNSIFYVLLAVYLDQV
IPGEFGLRRSSLYFLKPSYWSKSKRNYKELSEGNVNGNISFSEIVEPVSSEFMGKEAIRI
SGIQKTYRKKGENVEALRSLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASI
YGHRVSEIDEMFEARKIIGICPQLDIHFDVLTVEENLSILASIKGIPANNVIQEVQKVLL
DLDMQPIKDNQAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYG
KSNRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDKYCAT
ESLSSLVKQHIPGATLLQQNEQQLVYSLPFKDMDKFAGLFSALDSHSNLGVISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQQPPEEEMDSKSFDEMEQSLLILSETKASLVSTMSLW
KQQVYTVAKFHLLTLKRESKSMRSVLLLLLIFFAVQIFMFLVHRSFKNAVVPIKLVPDLY
FLKSGDKPHKYKTSLLLQNSTDSDISDLISFFTNQNIMVTMFNDSDYVSAAPHSAALNVM
YSEEDYVFTAVFNSTMVCSLPVLMNIISNYYLYHLNVTETIQVWNTPFFQEITDIVFKIE
LYFQAALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAIVDIPLFFLV
LILMLGSLFAFHYGLYFYAIKFLSVVFCLIGYVPSVILFTYVTSFTFKKILNTKEFWSFI
YSVTALACIAITEITFFMGYTVTAVLHYTFSIVIPIYPLLGCLICFIKTSWKNIRKNEDT
YNPWDRLLVAVISPYLQCVLWIFLLQYYEKKYGGRSIRKDPFFRTLSTKSKNRKHPEPPN
HEDEDEDVKAERLKVKELMSCQCCEEKPAIMVSNLHKEYEDKKDFLLTRKVKKVATKYVS
FCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSSDPGEDDDSIKYMGYCP
QINPLWPDITLREHFEIYGAVKGMNASDMKEVINRITSALDLKEHLQKTIKKLPAGIKRK
LCFALSMLGNPHITLLDEPSTGMDPKAKQHMWRAIRTAFKNKKRAAILTTHYMEEAEAVC
DRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQYIFPNAIRQ
ESFSSILAYKIPKEDVPSLSQSFSKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEED
NSCGTLNSTLWWERTQEDRVVF
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaattagggaggtgggagtttggagacagaccagaacactcctactgaag
aattatctaatcaaatgcaggactaaaaaaagtagtgttcaggaaattctttttccacta
ttttttttattttggttaatattaattagcatgatgcatccaaataagaaatatgaagaa
gtgcctgatagagaacttaatcctatggacaaatctgttctgtctaacttaatacttgga
tatactccagtgactaatattacaagaaacatcatgcaaaaagtttctactgatcatctt
cctgaggtcataattactgaagaatatacaaatgaaaaagaattgttagtatccagtctt
tctaagcccaacaactttgtgggtgtggttttcaaagacttcatgtcctatgaactccgt
ttttttcctgatatgattccagtatcttctatttatatggattcaagagctggctgttca
acatcgtgtgaggctgctcagtactggtcctcagggttcacagttttacaagcatccata
gatgctgccattatacagctgaagaccaatgtttccttctggagggaactagaatcaact
aaagctgtcattatgggagaaactgctgtggttgagatagatacctttccccgaggagta
attttaatatacctagttatagcattttcaccttttggatactttttggccattcatatc
gtagcagaaaaagagaagaagttaaaggagtttttaaagataatgggacttcatgacact
gccttttggctttcctgggttcttctgtatacaagtttgatttttcttatgtcccttctt
atggcagtcattgctacagcttcttcgttattccctcaaagtagctgcgttgtgatattt
ctactttttttcctatatgggttatcatctatattttttgctttaatgctgacacctctt
tttaaaaaatcaaaacatgtgggaatagttgaatttttggtcactgtggcttttggattt
gttggtcttttgatagtcctcatggaaagttttcccaaatcattagtgtggcttttcagt
cctttctgtcagtgtacttttttaatcggtatagcacaggtcatgcacctagaagatttt
aatgaaggtgctttattttctaatttgactgaaggcccatatcctctgattattactatt
gtcatgctagcgcttaatagtatattctatgtcctcttggctgtctatcttgatcaagtc
attccaggggaatttggcttacggagatcatctttatattttctaaagccatcatattgg
tcaaagagcaaaagaaattataaggagttatcagagggcaatgttaatgggaatattagt
tttagtgaaattgttgagcctgtttcttcagaatttatgggaaaagaagccataagaatc
agtggtattcagaagacatacagaaagaaaggtgaaaatgtggaggctttgagaagtttg
tcatttgacatatatgagggtcagattactgcattacttggccacagtggaacaggaaag
agtacattgatgaatattctttgtggactatgcccaccttctgatggatttgcatctata
tatggacacagagtctcagaaatagacgaaatgtttgaagcaagaaaaataattggcatt
tgtccacagttagatatacattttgatgttttgacggtggaagaaaacttatccattttg
gcttcaatcaaaggaataccagccaataatgtaatacaagaagtacagaaggttttattg
gatttagacatgcagcctatcaaagataatcaagctaaaaagttaagtggtggtcaaaaa
agaaaactgtctttaggaattgctgttcttgggaatccaaagatactattgctagatgaa
ccaacagctggaatggacccctgttctcgtcatattgtttggaatcttctgaagtatggg
aaatctaatcgggtgacagtgtttagtactcatttcatggatgaagctgacattcttgct
gataggaaagctgtcatatcacaaggaatgttgaaatgtgttggttcttcaatttttctc
aaaagtaaatgggggattggctaccgcctaagcatgtacatagacaaatattgtgccacc
gaatctctttcttccctggttaaacaacatatacctggagctaccttattacaacagaat
gaacaacaacttgtgtatagcttgccttttaaggacatggacaaatttgcaggtttattt
tctgctctagacagtcattcaaacttgggtgttatttcttatggtgtttccatgacaact
ttggaagatgtgttcttaaagctagaagttgaagcagaaattgaccaagcagattatagt
gtatttacccagcagccaccagaggaagaaatggattcaaaatcttttgatgaaatggag
cagagcttacttattctttctgaaaccaaggcttctctagtaagcaccatgagcctttgg
aaacagcaggtgtatacagtagcaaagtttcatttgcttaccttgaaacgggaaagtaaa
tcaatgagatcagtgttgcttctgcttttaatttttttcgcagttcagatttttatgttt
ttggtgcatcgctcttttaaaaatgctgtggttcccatcaaacttgttccagacttatat
ttcctaaaatctggagacaaacctcataaatacaaaacaagtctgcttcttcaaaattct
actgactctgatatcagcgatcttattagctttttcacaaaccagaacatcatggtgacg
atgtttaatgacagtgactatgtgtctgctgctccccatagtgcagctttaaatgtgatg
tattcagaagaggactatgtttttacagctgttttcaacagtactatggtttgttcttta
cctgtattgatgaatattattagtaattattatctttatcatttaaatgtgactgaaacc
atccaggtctggaataccccgttctttcaagaaattactgacatagtttttaaaattgag
ctgtattttcaagcagctttacttggaatcattgtcaccgcaatgccaccttactttgcc
atggaaaatgcagagaatcataagatcaaagcttatactcagcttaaactctcagggctt
ttgccatctgcatactggattggacaagctattgtggatatccccctattttttcttgtt
cttattttgatgctaggaagcttatttgcatttcattatggattatatttttatgctata
aagttcctttctgtggttttttgccttattggttatgttccatcagtcattctgtttacc
tatgttacttccttcacttttaaaaaaattttgaataccaaagagttttggtcatttatc
tattctgtgacagcattggcttgcattgcgatcactgaaataacattttttatgggatac
acagttactgctgttcttcattataccttttccatagtcattccaatctatccacttctg
ggttgtctgatttgtttcataaagacttcttggaagaatattcgaaaaaatgaggacacc
tataatccatgggataggcttttggtggctgttatatcgccttacctgcagtgtgtactc
tggattttcctcttacagtactatgaaaaaaaatatggaggcaggtcaataagaaaggat
ccttttttcagaactctttcaacaaagtccaaaaataggaagcatccagaaccaccaaac
catgaggatgaagatgaagatgtcaaagctgaaagactgaaggtcaaagagctaatgagt
tgccaatgttgtgaggagaaaccagccatcatggtcagcaatttgcataaagaatatgag
gacaagaaagattttcttcttacaagaaaagtaaagaaagtggcaactaaatatgtctct
ttctgtgtgaaaaaaggagagatcttggggctactgggtccaaatggtgcaggcaaaagc
acaattatcaatattctagttggtgatattgaaccaacttcaggccaggtatttcttgga
gattattcttcagacccaggtgaagatgatgattccattaaatatatgggatactgtcct
cagataaacccgctgtggccagatattacattgagggaacattttgaaatatatggagct
gtgaaaggaatgaatgcaagtgacatgaaagaagtcataaatcggataacaagtgcactt
gatttaaaagaacatcttcagaaaactatcaagaaactacctgcaggaatcaaacgaaag
ttatgttttgccctgagtatgttggggaatcctcacattaccctcctagatgaaccatct
acaggtatggatcctaaagccaaacagcacatgtggcgagcaattcgaactgcatttaaa
aacaaaaaacgggctgctattctgaccactcattatatggaggaagcagaggctgtttgt
gaccgagtggctatcatggtatctgggcagttaagatgtatcgggaccgtccaacatctg
aagagtaaatttggaaaaggctactttttggaaataaagttaaaggactggatagaaaac
ctagaagtagaccgtcttcaaagagaaattcagtatattttcccaaatgcaatccgtcag
gagagtttttcttctattttggcttataagattcctaaggaagatgttccatccctttca
cagtctttttctaagcttgaagaagctaaacatacttttgccattgaagaatatagtttt
tctcaagcaacgttggaacaggtttttgtagaactcactaaagaacaagaggaagaagat
aacagttgtggaactttaaacagcacactttggtgggaaagaacacaggaagacagagtg
gtgttttga
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integrated database retrieval system
