Vulpes lagopus (Arctic fox): 121473570
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Entry
121473570 CDS
T07435
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04080
Neuroactive ligand-receptor interaction
vlg04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121473570 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
121473570 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121473570 (TRPV1)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121473570 (TRPV1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
121473570
NCBI-ProteinID:
XP_041581999
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Position
12:13943197..13981806
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AA seq
882 aa
AA seq
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MDGAKRTLKNDGQSTQATQEGLGAWAVQSLEAASLATKDLARMKNWGSSDSGGSEDPPQE
DSCLDPLDGDPNSRPVPAKPHIFPTAKSRSRLFGKCDSEEASMDCSYEEGQLASCPAITV
SPVVMIPKHEDGPTCARQPSQDSVTAGSEKSLKLYDRRKIFEAVAQNNCEELQSLLLFLQ
KSKKHLMDSEFKDPETGKTCLLKAMLNLHDGQNDTIPLLLEIARQTDSLKELVNASYTDS
YYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC
TNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTADNTKFVTSMYNEILILGA
KLHPTLKLEGLTNKKGLTPLALAARSGKIGVLAYILQREIQEPECRHLSRKFTEWAYGPV
HSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFN
FFVYCLYMIIFTTAAYYRPVDGLPPYKLKHTVGDYFRVTGEILSVLGGVYFFFRGIQYFL
QRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFCHHKEYVASMVFSLAMGWTNMLYYTR
GFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKNNSVPTESTLHRWR
GPGCRPPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLN
MLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAFRSGKLLQVGYTPDGKD
DYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSLRSGRVSGRNWKNFSLVPLL
RDASTRERHPAQPEEVHLRHFAGSLKPEDAEIFKDPVGLGEK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgcaaagaggaccctgaagaatgatggacaatcaactcaggccactcaggag
gggttgggagcatgggcagtgcagagcttggaggctgcctctttggccacaaaagatctg
gcaaggatgaagaattggggaagctccgattcaggggggtctgaggacccgccccaagag
gactcctgcttagaccccctggatggagaccctaattccaggccagttccagccaagccc
cacatcttccctacggctaagagccgcagccgactttttggaaagtgtgactcagaggag
gcttctatggattgctcttatgaagaaggccagctagcctcttgcccagccatcacagtc
agtcctgttgtcatgatcccgaaacatgaggacggccccacctgtgccaggcagccatcc
caggactctgtgactgctggatctgagaagagcctcaagctctatgatcgcaggaagata
tttgaggctgtcgctcagaataactgtgaggagctgcagagcctgctgctcttcctgcag
aagagcaagaagcacctcatggacagcgagttcaaagacccagagacagggaagacctgt
ctgctgaaagccatgcttaacctgcatgatgggcagaatgacaccatccccctgctcctg
gagattgcccgtcagacggacagcctaaaggagttggtcaacgccagctacacagacagc
tactacaagggccagacagccctgcatattgccattgagaggcggaacatggcgctcgtg
accctcctggtggagaacggggcagacgtccaggctgcagccaatggggacttctttaag
aaaaccaaagggcggcctggcttctactttggtgagctgcccctgtccttggctgcatgt
accaaccagctgggcattgtgaagttcctgctgcagaactcttggcaacctgcagacatc
agcgccagggactctgtgggtaacaccgtgctgcacgcactggtagaggtggccgacaac
acagctgacaataccaagtttgtgacgagcatgtacaatgagattctcatcctgggcgcc
aagctccaccctacactgaagctggaggggctcaccaacaagaaggggctgacgccactg
gctctggcagccaggagtgggaaaatcggggtcttggcctatattctccagagagagatc
caagagcctgagtgcaggcatctgtccaggaagttcactgaatgggcgtatgggcccgtg
cactcgtcgctctatgacctgtcctgcattgacacttgtgagaagaactcagtgctggag
gtgattgcctacagcagcagtgagaccccgaatcgccatgacatgcttttggtggaacca
ctgaaccgactcctgcaggataagtgggacagatttgtcaagcgcatcttctacttcaac
ttcttcgtctactgcttgtatatgatcatcttcactacagcagcctactacaggcctgtg
gatggcttgcctccctataagctgaaacacactgttggagactatttccgagtcaccggc
gagattctttctgtattagggggagtctacttttttttccgagggattcaatatttcctg
cagaggcggccatcgctgaagaccttgtttgtggacagctacagtgagatgctttttttt
gtgcagtcactgttcatgctggggaccgtggtgctatacttctgccaccacaaggagtac
gtggcctctatggtgttctccctggccatgggctggaccaacatgctctactacacccgc
ggcttccagcagatgggcatctatgctgttatgattgagaagatgatcctgagagacttg
tgtcgcttcatgtttgtctaccttgttttcttgttcgggttttccacagcggtggtgaca
ctgattgaggatgggaagaataactctgtgccgactgagtccacattgcataggtggcga
gggcctggctgccggccacctgacagctcctacaatagcctgtactccacgtgtctggag
ctcttcaagtttaccatcggtatgggcgacctggagttcaccgagaactatgacttcaag
gctgtcttcatcatcttattgctggcctacgtgattctcacctatatccttctactcaac
atgctcattgccctcatgggtgagactgtcaacaagatcgcacaggagagcaagaacata
tggaagctacagagagctatcaccatcctggacacggagaagagcttccttaagtgtatg
aggaaggccttccgctcaggcaagctgttgcaggtggggtatacacctgacggcaaggat
gactacaggtggtgtttcagggtggatgaggtcaactggaccacttggaacaccaatgta
ggtatcatcaatgaagaccctgggaactgtgagggcatcaagcgcaccctgagcttctcc
ctgcggtcaggcagagtttcaggaagaaactggaagaacttttccctggttcccctttta
agagatgcaagtacaagagaaaggcaccctgcccaaccggaggaagttcatctgaggcac
tttgcagggtccctcaagccagaagatgctgagatcttcaaggatcctgttggtttaggg
gagaagtga
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