Vulpes lagopus (Arctic fox): 121473943
Help
Entry
121473943 CDS
T07435
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03030
DNA replication
vlg03420
Nucleotide excision repair
vlg03430
Mismatch repair
vlg03440
Homologous recombination
vlg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121473943 (RPA1)
03420 Nucleotide excision repair
121473943 (RPA1)
03430 Mismatch repair
121473943 (RPA1)
03440 Homologous recombination
121473943 (RPA1)
03460 Fanconi anemia pathway
121473943 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121473943 (RPA1)
03032 DNA replication proteins [BR:
vlg03032
]
121473943 (RPA1)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121473943 (RPA1)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121473943 (RPA1)
DNA replication proteins [BR:
vlg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121473943 (RPA1)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121473943 (RPA1)
MMR (mismatch excision repair)
121473943 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
121473943 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
A_deaminase
Motif
Other DBs
NCBI-GeneID:
121473943
NCBI-ProteinID:
XP_041582706
LinkDB
All DBs
Position
12:complement(15400067..15478618)
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMELNILKSAEAVGLKIGNPVPYNE
GHGQQQAVPSPVSAANPPANKPQQQNGSSAMGFTASKTYGASKTFGKPGGTSLASSSGGT
QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIGDLESKTKDSLIDIIGICKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVTATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGTGGGNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAII
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLIMNIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccatcatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaacatccgtcccattactacggggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgttgaggaagaacaattgtctagcaactgtatttgccagattaat
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggagttaaac
attttgaaatcagctgaagcagttggattaaagattggcaatcctgtgccctataatgaa
ggacatgggcagcagcaggccgttccttctccagtctcagcagccaatccaccagccaac
aagccccagcaacagaatgggagctcagcaatgggtttcactgcttctaagacttacggt
gcctcaaagacatttggaaaacctggaggtaccagcctagcgagtagttctggaggaaca
caggtcaaagtggtgcccattgccagccttactccttaccaatccaagtggactatctgt
gctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttcccctcatcgacatgaacaaggtctattatatctctaaaggc
atcctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacctacagttcagttt
gacttcacagggattggtgacctagaaagcaagactaaggattcacttatagacataatt
gggatctgcaagagctatgaagaagccaccaaaatcacagtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtagtgaccgctactctg
tggggggaagatgctgatagatttgatggttctagacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacgatcatt
gtgaatcctgacatcccggaggcctataaacttcgtggatggtttgactcggaaggacaa
gccttagatggtgtttccatctctgatctaaagagtggagggacaggaggaggcaacacc
aactggaaaactttgtatgaggttaaatcagagaatctaggccatggtgacaaggctgac
tattttagctccgtggcgacagtagtgtatcttcgcaaagagaactgtatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgatcgatcaacagaatggattataccgctgt
gagaagtgtgacagtgaatttcccagcttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcatt
ggacaaagtactgcttatcttggggaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaacttccgatctttcacattcaggatcagggtgaaactagagacc
tacaacgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatatggtagaaggctgatcatgaacatcaggagaaacgcgctaatgtga
DBGET
integrated database retrieval system
