Vulpes lagopus (Arctic fox): 121474164
Help
Entry
121474164 CDS
T07435
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03082
ATP-dependent chromatin remodeling
vlg04714
Thermogenesis
vlg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121474164 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121474164 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121474164 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121474164 (SMARCD2)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121474164 (SMARCD2)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121474164 (SMARCD2)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121474164 (SMARCD2)
PBAF complex
121474164 (SMARCD2)
GBAF(ncBAF) complex
121474164 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
121474164
NCBI-ProteinID:
XP_041582977
LinkDB
All DBs
Position
12:complement(46073124..46083420)
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPTGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTAGPPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcctccgctgagtcctggtggcggcgcc
gttgccgcggccctgggagcgccgcctccgcccgcgggacccggcatgctgccgggaccg
gcgctcagggggccagggccggctggcggcgtggggggccccggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcggcctggtatgtcaccggggagc
cggatgcccatggctggcttgcaggtgggaccccccaccggctccccatttggcacagct
gctccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctgctt
gtgccccaggcccagcccccaatgcccgcccaacgccgggggctaaagaggaggaagatg
gcagataaggttctacctcagcgaattcgggagcttgtcccagagtctcaggcgtacatg
gatctcttggcttttgagcggaagctggaccagaccattgcccgaaagcggatggagatc
caagaggccatcaaaaagcctctgacgcaaaaacgaaagctgcgcatctatatttccaat
acgttcagtcccagcaaggcagaaggcgatactgcgggcaccgcggggccccctgggggg
acccctgcaggggacaaggtggcttcctgggaactccgagtggagggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattctttaagagcctcgtcattgagctg
gacaaagagttatacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagactgatggcttccaggtcaaacggcctggagacctcaacgtcaagtgcaccctc
ctgctcatgctagatcatcagcctccccagtacaagttggacccccgactggcaaggctg
ctgggggtgcacacacagacaagggcggccatcatgcaggctctttggctttatatcaaa
cacaaccaactgcaggatgggcacgagcgcgagtacatcaattgcaaccgttacttccgc
cagatcttcagttgtggccgacttcgtttctctgagattcccatgaagctggctgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagcgtagaccctaacgaccag
aagaagacagcatgttacgacattgatgtggaggtagacgacccactcaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagattgcctccctcgatgtcaagatc
catgagaccattgagtccatcaaccagctcaagacccagagggatttcatgctcagcttt
agcacggaccctcaggacttcatccaggaatggctccgttctcagcgtcgagacctcaag
atcatcactgatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcaa
gaactggaacaggtgctgggaatccgcttgacctaa
DBGET
integrated database retrieval system
