Vulpes lagopus (Arctic fox): 121474225
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Entry
121474225 CDS
T07435
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121474225 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
vlg04054
]
121474225 (DHX58)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121474225 (DHX58)
Pattern recognition receptors [BR:
vlg04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
121474225 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
Terminase_6N
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121474225
NCBI-ProteinID:
XP_041583090
LinkDB
All DBs
Position
12:complement(40699825..40708492)
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AA seq
678 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIMWLPTGAGKTRAAAYVAKRHLETVDRAKVVVLVNRVHLV
TQHCEEFSRMLGKRWAIITLSGDMGPRAGFGHLARSHDLIICTAELLQMALTSPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNLILSRYLEHKLQRTRPLPQVLGLTASPGTGGASTLDG
AIDHILQLCANLDTWRIMSPENHRPQLQEHSAQPCKQYSLCHRRSQDPFGDMLKKLMDRI
HNRLEMPVLSRDFGTQTYEQQVVELSQDAAQAGLQQRRVYALHLRRYNDALLIHDTVRAV
DALKSLGDFYDRERATKTQVLQAERWLLALFDDYKNELAHLATQSPENPKLEMLEQILRE
QFGHSDSPRGIIFTQTRQSTHSLLLWLQQQPGLQTVDIRADLLIGAGNSSQNTHMTQRDQ
QEVIRKFRVGTLNLLVATSVAEEGLDIPHCNVVVRYGLLSNEISMVQARGRARAGQSIYS
FVATQGSRELRRELMNEVLETLMERAVAAVQKMDQAEYQAKIRDMQRAALVKRAVQAAQR
DNQRQQFLAEQVQLLCVNCMVAVGHGSDLRKVEGAHHVNVNPNFSIYYNVSRGPVVIDRT
FKDWRPGGTIHCRNCGEVWGLQMIYKSVKLPALKVRSMLLETPQGRVQAKKWSRVPFPVP
DFDYLQHCAQNLADLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcatgtggctgcccactggagctgggaaaacccgggctgctgcttatgtggccaagagg
catctagagactgtggaccgagccaaggtggttgtactggtcaacagggtgcacctggtg
acccagcattgtgaggagttcagccgcatgctgggcaaacgctgggccattataaccctg
agcggggacatggggccacgagctggctttggccacctggcccggagccatgacctgatc
atctgcacagctgagctgctacagatggcgctgaccagcccggaggaggaggagcatgtg
gaactcaatgccttctccctgctcgtggtggatgagtgtcaccacacgcacaaagacact
gtctacaacctcatcctgagccggtacctagagcataaactccagaggacacggccgctg
ccccaggtgctgggtctcacagcctccccgggcactggtggggcctccacgctcgatgga
gcaattgaccacatcctacagctctgtgccaacctggacacgtggcgcatcatgtcaccg
gagaaccatcgcccccagctgcaggaacacagtgctcagccatgcaaacagtacagtctc
tgccataggcgcagccaggacccatttggggacatgctgaagaagctcatggaccgaatc
cacaaccgcctggagatgcctgtgttaagccgcgactttgggacacagacttatgagcag
caggtggtggagctgagccaggatgcggcccaggccggactccagcagcgccgggtatac
gctcttcacctgcggcgctacaatgacgcgctgctcatccacgacacggtccgtgctgtg
gatgccctgaagtcgctgggagatttctacgacagggagcgtgccacgaagacccaggtc
ctgcaggctgagcgctggctgctggcactgttcgatgattacaagaatgagctggcccac
ctggcaacacagagcccagagaacccaaaactggagatgctagaacagatcctgcgggag
cagtttgggcattccgacagccccaggggcatcatcttcacccagacccgccagagcact
cactccctcctactctggctccagcagcagccaggcctgcagacagtggacattagggct
gacctgctgattggggctggaaatagcagccaaaacacccatatgacccagagagaccag
caagaagtgatccgaaagttccgggttggcactctgaacctcctggtggctacaagtgtg
gcagaagaggggctggacatcccccattgcaacgtggtggtacgttacgggcttctgtcc
aacgagatctccatggtccaggcaaggggccgggcccgggctggtcagagcatatactca
tttgtggcaacccaaggcagtcgggagctacgacgggagctgatgaacgaggtgctggag
actttgatggagcgggccgtggctgctgtgcagaagatggaccaggctgagtaccaggcc
aagatccgagatatgcagcgggcagccctggtcaagagggcagtccaggcagcccagcgg
gacaaccagcggcagcagttcctggcggagcaggtgcagctcctctgcgtcaactgcatg
gtggctgtgggccacgggagtgacctgcggaaggtggagggcgctcaccacgtcaatgtg
aaccccaacttctcaatctactacaatgtctcccgggggccggtggtcattgacagaacc
ttcaaggactggaggcctgggggtaccattcactgcaggaactgtggggaggtctggggc
ctgcagatgatctacaagtcagtgaagctgccggcgctcaaagtccgcagcatgcttcta
gagacaccccaagggagagtccaggccaagaagtggtcccgtgtgcccttccccgtgcct
gacttcgactacctgcagcactgtgcccagaacctggcggacctctccctggactga
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