Vulpes lagopus (Arctic fox): 121474551
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Entry
121474551 CDS
T07435
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121474551 (VPS50)
Membrane trafficking [BR:
vlg04131
]
Protein recycling
Others
EARP complex
121474551 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
121474551
NCBI-ProteinID:
XP_041583431
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All DBs
Position
13:18453528..18586508
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AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaaaagccctccggagagcctt
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagta
tatttttctacggactcatttgatattgttaaatatgagctggagaaactccctcccgtc
ctcaacttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcaattagctgctgttatctgcacaaatgggagg
agacacttgaatattgccaaggaaggtttcactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaaccgatgtgcgcttaagtgaaatgcttgaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagccgctagcacttttaagcattatagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgtagct
ctttccaaaatctgtaagaattttgacattaaccattacactaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcactttactcaagcc
attcataatactgtatttcaagttgttcttggttatgtggagctatgttcaggaaacaca
gatacaaaattccaaaagctgcagtataaggatctctgtacacatgttacaccagacagc
tatattccatgtcttgctgacctatgcaaagcattgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactacttctgcttctgaaggg
agtaatattggtactgaagagactaattttgatcgtggctacataaaaaagaaattagaa
catggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttgga
acagatttgtctatatttaaatatgatgatttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagaatccatt
agaaaacaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacctgggagctttgtcctgttaagtcaaatttcagcatcctg
caacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacccagtaaa
cagccagcttcaacttcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccctttgaaatccaggccaaccacaaagatgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgagcaagaaaaaagtgcctatcaggagtatgacagcgacagt
gatgttcctgaggaactgaaacgagattatgtggatgagcaaacgggtgatgcacctgtg
aaaagcgtttctagagaaactctaaaaagcaggaagaaatcagattatagtctaaataaa
gtgaatgcacccatcttaaccaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtctcag
ctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcactggaa
tccacaggactaggccttagtagtagtagattgagaacaactcttaacagaatacaagaa
agccttattgatatggaagtttcagctgatcctaccgccacccttaccgcagcagaagag
agaaaagagaaggtaccaagcccacacctcagtcacctagtggttttgacatctggggat
acgttatatgggctggcggaaagagtggtagccacagaatccttggtattcttggctgaa
cagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaagcccttt
ctccagcagttttattctcagacagtttcaactgccagtgaactacgcaaaccaatttat
tggatcgtagccggtaaagctattgattatgaacagatgctgctcctaatggctaatgtg
aagtgggatgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctaaag
gaatttgagcaatttaacaggaggttaaatgaggtttctaagagagttcggatacctctg
cctgtgtctaatatactttgggaacactgtatacggctggccaacagaactattgtggaa
ggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccctgatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaa
tttgtggagacatatattaaagcctactacctaactgagaatgacatggaacgctggatc
aaagagcacagggaatattcaacgaagcagctgaccaatctggtaaatgtttgcctggga
tctcatatcaataagaaagcaagacaaaaactcctcgctgctatagatgatatagacaga
cccaaaagataa
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