Vulpes lagopus (Arctic fox): 121475298
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Entry
121475298 CDS
T07435
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03018
RNA degradation
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121475298
09123 Folding, sorting and degradation
03018 RNA degradation
121475298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121475298
03041 Spliceosome [BR:
vlg03041
]
121475298
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121475298
mRNA degradation factors
5'-3' decay
Lsm complex
121475298
Spliceosome [BR:
vlg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121475298
Complex C
U2 snRNP components
121475298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
121475298
NCBI-ProteinID:
XP_041584419
LinkDB
All DBs
Position
14:complement(28264936..28267049)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVSKDLVVELKNDLSICGTLHSMDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVHCVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctattcctttttcaagtccctggtgagcaaggatctggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccattctatggatcagtatctcaacatcaaacta
actgacatcagtgtcacagaccctgagaaatatcctcacatgttgtcagtgaagaactgc
ttcatccgtggctcagtggtccactgcgtgcagttgccagcagatgaggtggacacacag
ttgctgcaggatgcagcgaggaaggaggccttgcagcagaaacagtga
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