KEGG   Vulpes lagopus (Arctic fox): 121475417
Entry
121475417         CDS       T07435                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03030  DNA replication
vlg03410  Base excision repair
vlg03420  Nucleotide excision repair
vlg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121475417 (RFC5)
   03410 Base excision repair
    121475417 (RFC5)
   03420 Nucleotide excision repair
    121475417 (RFC5)
   03430 Mismatch repair
    121475417 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vlg03032]
    121475417 (RFC5)
   03036 Chromosome and associated proteins [BR:vlg03036]
    121475417 (RFC5)
   03400 DNA repair and recombination proteins [BR:vlg03400]
    121475417 (RFC5)
DNA replication proteins [BR:vlg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121475417 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    121475417 (RFC5)
Chromosome and associated proteins [BR:vlg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121475417 (RFC5)
DNA repair and recombination proteins [BR:vlg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121475417 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    121475417 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 AAA_19 ATPase_2 AAA_30 PhoH AAA_7 TIP49 TniB nSTAND3 DNAX_ATPase_lid Mg_chelatase Thioredoxin_6 bpMoxR NPHP3_N AAA_25 AAA_3 ABC_tran AAA_28
Other DBs
NCBI-GeneID: 121475417
NCBI-ProteinID: XP_041584615
LinkDB
Position
14:complement(22254608..22265745)
AA seq 340 aa
METSAQQEQQQPAAAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVGEEKVDLSEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagacctcagcgcagcaggagcagcagcagcccgcggcggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacgctgaatgatctgatttctcatcaggacatt
ttgagtaccattcaaaaatttatcagtgaagaccggttgccccacctgctcctctatggt
cctccagggacaggaaagacttccaccatcctggcctgtgcaaaacagctatacaaagat
aaggaatttggctccatggtcttggagctgaacgcttcagacgaccgaggaatagatatt
gttcggggaccaatcctgagcttcgctagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcctggatgaagctgacgccatgactcaagacgcccagaatgccttgaggaga
gtgattgagaagttcaccgagaacacccggttctgcctcatctgtaactatctgtcaaag
atcatcccggccttgcagtcccggtgtacgaggttccgattcggccccctgacccccgag
ctcatggttccccgcctggagcacgtcgtaggagaggagaaagtggacctaagtgaggac
gggatgaaagcactcgtgaccctttccagcggagatatgcggagggctctgaacattttg
cagagcaccaatatggccttcgggaaggtgacagaggaaacggtctacacctgtaccggg
caccccctcaagtcagacattgctaacattctggactggatgttgaatcaagacttcacc
acagcctacaggaatataatggagttgaaaacgctgaagggcttggcgctacatgatatc
ctgacggagatacacttgtttgtgcacagagttgactttccatcttcggttcgagtacat
ttactgaccaaaatggcagacatagagtacagactttctgttggcaccaatgagaagatt
cagctgagctctctcattgccgctttccaggtcaccagggacctgattgttacagaggcc
tag

DBGET integrated database retrieval system