Vulpes lagopus (Arctic fox): 121475524
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Entry
121475524 CDS
T07435
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg05014
Amyotrophic lateral sclerosis
vlg05017
Spinocerebellar ataxia
vlg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121475524 (ATXN2)
05017 Spinocerebellar ataxia
121475524 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
121475524 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121475524 (ATXN2)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121475524 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
121475524
NCBI-ProteinID:
XP_041584780
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All DBs
Position
14:27504262..27618951
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AA seq
1146 aa
AA seq
DB search
MSLKPQQQQQQQPPQQPQPPSAAASARKPGGSGGLLSSPAAAPPPSSVSSSSAVASSSAA
AAAAASAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGI
YEGVFKTYSPKCDLVLDAAHEKSMESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAR
RDAFTDSAISAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSNGWDPNDMFRYNEENY
GVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEE
KYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRST
SHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPP
SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF
VSHTPPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNNPGGPVLAS
PQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPN
ETSPSFSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSR
DLLKDKIEPNAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSS
PGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMV
GHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQR
QEQHHQSAMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYS
PVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTG
SLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP
QQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVP
QAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQA
HHQQQL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagcctcagcaacagcagcagcagcagccgccgcagcagccgcagccgccg
tccgcggccgccagtgctcgtaagcccggcggcagcggcggccttctctcgtcgcccgcc
gccgcgccgccgccgtcctcggtctcgtcctcctcggcagtggcttcctcctcggcggcg
gcggcggcggcggcgagcgcaggcggcgggcggcccggcctgggcagaggtcgaaacagc
aaaggactgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggtt
catatacttacatcagtcgttggatccaaatgtgaagtacaagtgaaaaacggaggcata
tatgaaggagtttttaaaacatacagtcctaagtgtgatttggtacttgatgctgcacat
gagaaaagtatggaatccagttcggggccaaaacgtgaagaaataatggagagtattttg
ttcaagtgttcagactttgttgtggtacagtttaaagatatggactccagttatgcaaga
agagatgcttttactgactctgctatcagtgctaaagtaaatggtgaacacaaagaaaag
gacctggagccttgggatgcaggtgaactcactaccagtgaggaactggaggctttggaa
aatgatgtatctaatggatgggatcccaatgatatgtttcggtataatgaagaaaattat
ggtgtagtgtctacatatgatagcagtttatcttcatatacggtacccttagaaagggat
aattcagaagaatttttaaaacgagaagccagggcaaaccagttagcagaagaaattgaa
tcaagtgcccagtacaaagcccgggtggccctggaaaatgatgataggagtgaagaagaa
aaatacacagccgttcagagaaattccagtgaacgtgagggccacagcataaacactagg
gaaaataaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtggg
agacagaattcaccacgtatgggccagcctggatcgggctccatgccatcaagatccacc
tctcacacttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggt
gttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtca
ggtcccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccc
tcgcggccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctct
actatgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcga
caccctcgaaatcacagagtttctgctgggaggggttccatttccagtggcctagaattt
gtatcccataccccaccaagtgaagcagctgctcctccagcagcaaggactagtcccgca
gggggcacatggtcatcagtggtcagcggggttccaagattatcccctaaaactcacaga
cccaggtctcccagacagaacagtattggaaataatcctggtgggcctgttcttgcttct
cctcaagctggtattattccagctgaagctgttgctatgcctgttccagctgcatctcct
acgcctgccagtcctgcatccaacagagctgttaccccatcgattgaggctaaagattcc
aggcttcaagatcagaggcagaactctcctgcagggaataaagaaaatatgaagcccaat
gagacatcacctagcttctcaaagactgaaaataaaggtatatcaccaattgtttctgaa
catagaaaacagattgatgacttaaagaagtttaagaatgattttaggttacagccaagt
tctacttctgaatctatggatcaactgctaaacaaaaatagagagggagaaaaatcaaga
gatttgctcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagtagc
agcaattgcaccagtggcagcagcaaaccgaacagtcccagcatttccccttcaatcctc
agtaatacggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagt
cctggatgtaaacaagagaaagatgataaagaagagaagaaagatgcagctgagcaagtg
agaaagtcaactttgaatcctaatgcaaaggagttcaaccctcgttccttttctcagcca
aagccttctaccaccccaacttcacctcgtcctcaagcacaacctagcccatctatggtg
ggccatcagcagccagctccagtttatactcagcctgtttgttttgcaccaaatatgatg
tatccagtcccagtgagcccaggcgtgcaacctttataccctatacctatgacgcccatg
ccagtgaatcaagccaagacatatagagcaggtaaagtaccaaatatgccccaacagcgg
caagagcagcatcatcagagcgccatgatgcaccctgcctcagcagcaggcccgccgatt
gtggccaccccaccagcttattccacacagtacgttgcctatagtcctcagcagtttcca
aatcagcctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagt
cctgtaatacagggtaatgctagaatgatggcaccgccagcacatgcccagcctggttta
gtgtcttcttcagcaactcagtacggggctcatgagcagacacatgcgatgtatgcatgt
cccaaattaccatacaacaaggagacaagcccttctttctactttgccatttccactggc
tcccttgctcagcagtatgcgcaccctaatgctaccctgcacccacatactccacatcct
cagccttcagctacccccaccggacaacagcaaagccaacatggtggaagtcatcctgca
cccagtcctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtcca
cagcagcagtcagccatttaccacgcggggcttgcaccaaccccaccttccatgacccct
gcctccaatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtctttaca
atccatccttctcatgttcagccggcatacaccaatcctccccacatggcccacgtacct
caggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatg
ctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacag
cccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcagtacaagcc
caccaccaacagcagttgtaa
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