Vulpes lagopus (Arctic fox): 121476835
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Entry
121476835 CDS
T07435
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121476835 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121476835 (LMO7)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121476835 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121476835
NCBI-ProteinID:
XP_041586855
LinkDB
All DBs
Position
16:complement(32095016..32292451)
Genome browser
AA seq
1805 aa
AA seq
DB search
MEEPGADCAVAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLVNKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVRQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDASCLKRSGRDSGYGDIWCAERGDFP
TSPGNHKREDSFESLDSLGSRSFTSCSSDITLRGGREGCESDTDSEFTSKMQDYNKDDMS
YRRISAIEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKNEDNRRSWASPVYPEADGTF
PSGHTGNPLISHQISRAEWDFSNPACCQKEVYGSESGSDSEDERRLPDIVLDDLANRRFR
VKKRPECFISKTTSPSSCSQRFPPADPLATGLYKLTSNERRTWGTNVENWPTVQETSSSS
CYLEEEREKTRTPNTIKDDLYVRKLSPIMPNPGNAFDQFLPKCWIPEDVNWKRIKRETYK
PWYKEFQGFRRNSDSEDEDLGSDRSSSIFSRIQKAKHRLDSNCQRRSLLLELATKGARSS
RNTRAARRTSGSADEPSQFLLLQALQTYSDDILASETNIKIDPTAGPRLITRRKNLSSAP
GCKRDDLEMPTLDPDLENDDFFVRKTGAFHANPYVLRAFEDLRRFSEPDDSVERDIILQC
REGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPERYQPVPLPEPWTLPPEIQAKFLCVLE
RTHPSKEKRKSCGVLVPSSRKKRDDMLTRKIQSWQLGTTVPPVSFTPGPCSEADLRRWEA
IREASRLRHRKRLMVERLFQKIYGENGSKSMSDVSAEDIQNLRQLRYEEMQKIKSQLKEQ
DQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSERSSKTFKEMLQDRESRNQM
STVTSRRRLHSNDDVLNEEMLSPTLTMSEASYQSERVEEKETMYSTEIPKQDSTTFVKRE
DAVTTDIQLPSQSPMEEQLPDSLSSQHSLSTQMESTRVSASLPRSYQKTDTARLTSVVTP
RPFGSQARGISSLPRSYTMDDAWRYNGDIEDDKRTQNSFVSTSVQKPDTSQLASSKSSET
EIAAVGEDVMGLPSPTPSFSSLSQDQAATSKATLSSTSGPDLVSELGEGRSSPQTEVSRS
QDQFSDMRISINQTPGSGLDFGFTVKWAFSGIFVASVEAGSPAEFSQLQVDDEIIAVNNT
KFSYKDTKEWEATMANAKETGNLVMDIRRYGKSDWGKDQPSLPFIRHKTLNLTSMATKII
GSPETKWIDTTSGIYNSDKSSSLSITTDFSESLQHSNTESKEINGIRDESNTFESKASEP
ISLKNLKRRSQFFEQGSSDSVVPDLPVPTLSTPSRWAWDQEEERRRQERWQREQDRLLQE
KYQREQEKLREEWQRAQQEAERENYKYLNEEQMVLSSHSLSRPTREPAVATWETAWGEGS
KSSDREGTRAGEEERRPQQKEDEEDQRKRLQEQLALEKERKLKEQQDQEEQERRRRQEEA
QEQKPQAERERETTVKIYQYRRPIDSYDIPKREEQSSGLLPSDRNKSRSTTELDGYPANK
NGGSKYSDQIGSTSSSQRSSKKEQAPSEAELERQQILQEMRKRTSLLDDNSWIRQRSSSV
NKEPICLPGIMRRGESLDNLDSPRSSSWKPSPWLNQPSGVRASSSVQDFSRPPPQLVSTS
NRAYMRNPSSSIPPPSSAGSVQTTTAPSPTPHSPSPSLSQSGSQLRNRSVSGKRVCSYCN
SILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCYLRFKSG
RPTAM
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccggggccgactgcgcggtagccttcgccgaggcccagagatgggtggag
gcagttacagagaagaattttgaaacaaaggattttcgagcttcactagagaatggtgtt
ctgttgtgtgatttggttaataaacttaagcctggtgtcattaagaagattaatagatta
tccacaccgatagcaggtttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaaccgagtc
accgtcaggcaagaagagactgataggagagtgaaaaatgttttgataacactgtactgg
ttgggaagaaaagcacaaagtaacccgtactataatggaccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggctcttgaagacgctagctgtctgaaa
aggagtggcagggacagtggttacggtgatatctggtgtgctgaacgtggagattttcct
acttctccaggcaaccataagcgagaagattcatttgaaagcttggactctttggggtct
agatcattcacaagctgctcctctgatattacgttgagagggggacgtgagggttgcgaa
agtgacacagattctgaatttacatccaaaatgcaggattataataaagacgatatgtcc
tatcgaaggatttcagcaattgaaccaaaaactgctttaccattcaatcgttttttgccc
aataaaagtagacagccatcctatgtgccagcgccattgagaaagaaaaagccggacaaa
aacgaggataacagaagaagttgggccagcccggtctatccagaagcagatggaacattt
ccaagtggacacacagggaatcctttaatttcccatcaaattagcagagcagagtgggat
ttttcaaatccagcttgctgtcagaaggaggtgtatggttctgaaagtggttctgactcc
gaggatgaacgaaggttgcctgacatagttttggatgacttagccaaccgtagattccga
gtgaaaaagaggcctgagtgtttcatctcgaaaaccacctctcctagctcttgctcacaa
aggtttcctcctgctgacccattagccactgggctgtacaaattgacgagtaacgagagg
agaacttggggcacaaatgtggagaattggccaaccgtacaagaaacttcaagctcctct
tgttacttggaagaggaaagagaaaagacaaggacacccaacaccataaaggatgatctt
tatgtgcgaaagctaagtcccatcatgccaaatccagggaatgcttttgatcagtttctt
cccaaatgttggatcccagaagatgtgaactggaaaagaataaagagagaaacttacaaa
ccatggtataaagaatttcagggattcaggaggaattcagattctgaggatgaggatttg
ggctctgacagaagctcctccatatttagtagaatccaaaaagcaaagcataggctagac
agcaactgccaaagacgttcactcttgctggaattggctaccaaaggggccaggagctcc
cggaacacccgtgcagccaggagaaccagtggttctgcggatgagcccagtcagttttta
ttacttcaggcactccaaacatattctgatgacatcttagcttctgaaacaaatatcaaa
attgatcccactgccggcccaaggctcataacacgcagaaagaatctctcttctgcaccg
gggtgtaaaagagatgaccttgagatgccaactctagatcccgacttggagaatgatgat
ttctttgtcagaaagactggggctttccatgcaaatccatatgttctccgggcttttgaa
gacttaagaaggttttctgagccagatgattctgtagagcgagatataattctgcagtgt
agagaaggtgaacttgtacttccagatctagaaaaagatgacatgattgttcgccgaatt
ccagcgcagaagaaagaggtgcctctgtcaggggccccagagagataccaaccagtccct
ctccccgaaccctggactcttcctccagaaattcaagcaaaatttctctgcgtacttgaa
aggacacacccatccaaagaaaaaagaaagagctgtggagtcttagtgccttcctccagg
aagaagagagatgacatgttgactcgcaagatccagtcttggcaactggggacgactgtg
cctcctgtcagtttcactcctggtccctgcagtgaggcggacctgcggaggtgggaggcc
atccgagaggccagccgacttaggcacaggaaacggctgatggttgagagactctttcaa
aagatttatggtgagaatgggagtaagtccatgagtgatgtcagcgcagaggatattcag
aacttgcgtcagctgcgttacgaggagatgcagaaaataaaatcacaattaaaagagcaa
gatcagaaatggcaagatgaccttgcaaaatggaaagatcgtcgaaaaagctacacttca
gatcttcagaagaaaaaagaagagagggaagaaattgaaaagcaggcacttgagaagtcc
gagagaagctctaagacctttaaggaaatgctacaggacagggaatcccgaaaccaaatg
tccacagtgacatcgaggaggaggttgcattctaatgatgatgtgttgaatgaagagatg
ctttctcctacactgactatgtcagaagcaagttaccagagtgagagagtagaagagaag
gaaaccatgtattctacagaaattcctaaacaagattctacaacttttgtgaaaagagag
gacgctgtaaccactgacattcagctaccttctcaaagccccatggaagaacaactccca
gactctttgtcttctcagcattcactaagtacacaaatggagtcgactcgagtttcagcc
tctctccccagaagttaccagaaaaccgatacagccaggttaacatctgtggtcacacca
agaccttttggctctcaggcgaggggaatctcatcactcccaagatcctacacgatggat
gatgcttggaggtataatggagatatagaagatgataagagaactcagaacagctttgtc
agcacctctgtgcaaaaacccgacacaagccagcttgcttccagcaagtccagcgagaca
gagatagcagcagtgggagaagatgtgatggggctgccctctcctacaccctccttctca
tcactttcccaggaccaagctgccacttctaaagccacactgtcttcaacatctggccct
gatttagtatctgagcttggagaagggagaagctcaccacagacggaggtctcaagatcg
caggatcagttcagtgatatgagaatcagcataaaccagacgcctgggagcggtcttgac
tttgggtttacggtaaaatgggcattttctgggatcttcgttgcatcagtcgaagcaggt
agtccagcagaattttctcagctgcaggtagatgatgaaattattgctgttaacaacact
aagttttcatataaggacacaaaagagtgggaggcaaccatggctaatgctaaagaaact
ggaaacctagtaatggatatcaggcgctatggaaagtctgactggggcaaagaccaacct
tccctgccatttatacgtcataaaaccctcaatctcaccagtatggctaccaaaattata
ggttcacctgaaacaaagtggattgatacaacttctggaatttacaattctgataaatct
tcaagtctgtcaataacgactgatttctcagaaagcctccagcattctaatactgaatct
aaggaaattaatgggatccgtgatgaaagtaatacttttgaatcgaaagcctctgaacct
atttctttgaaaaacttaaaaaggcgatcacaattttttgaacaaggaagctcggattct
gtggttcctgatcttcctgttccaacgctcagtaccccgagccgctgggcgtgggatcaa
gaggaggagcgcaggcggcaggagagatggcagagggagcaggaccgcctgctgcaggag
aagtatcaacgtgagcaggagaaactcagggaagagtggcagagggctcagcaggaagct
gaaagagagaattacaagtacttgaacgaggaacagatggtcctgagctcacacagcctt
tcccggcccactcgggagcccgccgttgccacctgggaaaccgcctggggtgagggttcc
aagtcatcagaccgggaaggcacccgagcaggagaagaggagaggagaccacagcagaag
gaggatgaggaggaccaaagaaagaggctgcaggagcagctcgctctggagaaagagagg
aaactgaaggagcaacaggatcaagaagagcaggagcggcgtcggcgtcaagaggaggcc
caggagcagaagccccaggcagaaagagagagggaaaccacagtcaaaatataccagtac
agaaggcctattgattcctatgatataccaaagagagaagaacagtcttcagggttgctt
cctagtgacaggaataaatccagatccactaccgaactggatggttaccctgcaaataaa
aatggaggcagtaaatattcagaccaaattgggagcactagctcatcacagaggagctcc
aagaaggaacaagccccatcagaagcagagttagagagacaacaaattcttcaagaaatg
agaaagaggacatctcttctcgatgacaatagctggatccgacagcgcagttccagtgta
aataaagagccgatttgtctgcctgggattatgagaagaggtgaatctctagataacctt
gattccccaagatccagttcttggaaaccatccccttggctcaatcagccttcaggagtc
cgtgcttcttcctctgttcaagactttagtcgcccccctcctcagctggtgtccacgtcg
aaccgtgcctacatgcggaatccatcttccagcatcccccctccttcttcagctggttct
gtgcagaccaccaccgcaccttctcccacaccacacagtccttctccttcactatcacag
tcgggctcccagctacgcaacaggtcagtgagtgggaagcgcgtgtgctcctactgtaat
agcattctgggcaaaggagctgccatgatcatcgagtccctgggtctttgttatcatttg
cattgttttaagtgtgtggcctgcgagtgtgacctcggaggctcctcctcaggagccgaa
gtcagaatcagaaaccatcaactgtactgcaacgactgctatctcagattcaaatctgga
cggccaactgccatgtga
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integrated database retrieval system
