Vulpes lagopus (Arctic fox): 121477000
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Entry
121477000 CDS
T07435
Symbol
TRIM13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13 isoform X1
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121477000 (TRIM13)
Enzymes [BR:
vlg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121477000 (TRIM13)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121477000 (TRIM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
ATP-synt_E_2
Herpes_IE2_3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121477000
NCBI-ProteinID:
XP_041587112
LinkDB
All DBs
Position
16:59856531..59868631
Genome browser
AA seq
413 aa
AA seq
DB search
MLFQDVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGTVRNSLWRASPFKC
PTCRKETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLIC
GICATRGDHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQL
LTRDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFN
IAEAFKDVSEPIIFLQQMQEFREKIKVIKETPLPPSNLPTSPLMKNFDTSQWEDIKLVDV
DKLSLPQDTGTFISKIPWSFYQLFVVVLLFGLLVFFGPTIFLEGSLFDELTIWKDHLSNF
SSYLTKSADFVEQSMFYWEQVMDGFFIFSEKFKNFMLVVLNNVADFVCKYKLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctcttccaggatgtgatggagctgcttgaagaagatctcacgtgcccaatttgttgc
agtctgtttgatgatcctcgagttttgccttgctcacacaacttttgcaaaaaatgctta
gaaggtatcttagagggaactgtacggaattccttgtggagagcctctccattcaagtgc
cctacatgccgtaaggaaacgtcagctactggagttaatagcctgcaggttaattactcc
ctgaagggtattgtggaaaagtataacaaaatcaagatctctcccaaaatgccagtgtgc
aaaggacacttagggcagcctctcaacattttctgcttgactgatatgcagctcatttgt
gggatctgtgctactcgtggtgaccacaccaagcacgtcttctgttctattgaagatgcc
tatgctcaggaaagagatgcctttgagtcgctcttccagagctttgagacctggcgtcgg
ggagatgctctttctcgcttggataccttggaaactagcaaaaggaaatctctacagtta
ctgactagagattcagataaggtgaaggagttttttgagaagttacaacacacattagat
caaaagaagaacgaaatcctgtctgactttgagaccatgaaacttgcagttatgcaagcc
tatgacccggagatcaacaaactcaacactatcttgcaggaacaacgaatggcctttaac
attgctgaggctttcaaagacgtgtcagaacccatcatatttctgcaacagatgcaggag
ttcagggagaaaataaaagtaatcaaggagactcctttacctccctctaacttgcccacc
agtcctttaatgaagaactttgataccagccagtgggaagacataaaactagtagatgtg
gataaactttccttgcctcaagacactggcacattcattagcaagattccctggagcttt
tatcagttgtttgtggtggtccttctgttcggccttcttgttttctttggtcccactata
tttctagaaggatctttatttgatgaactcacaatttggaaagaccatctctcaaacttc
agttcctatctgactaaatcagctgattttgtagaacaatcaatgttttactgggaacag
gtgatggatgggtttttcattttcagtgaaaaatttaagaattttatgttggtggtgctg
aacaatgtggcagactttgtgtgcaaatataaactattataa
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