Vulpes lagopus (Arctic fox): 121477026
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Entry
121477026 CDS
T07435
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121477026 (SOX1)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121477026 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121477026
NCBI-ProteinID:
XP_041587142
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Position
16:complement(1578899..1580089)
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AA seq
396 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGGGVAKASQDRVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPD
YKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGVGAAAVGQRLESPGG
AAGGGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHH
PHAHPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNS
AVAAAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPGGETGD
PAAAAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgccgggcggcgcccaggcccccacg
aacctgtcgggcccggccggggccggcggcggcggcggcggcggcgggggcggcggcggc
ggcggcggcggcggggtcgccaaggccagccaggaccgcgtcaagcggcccatgaacgcc
ttcatggtgtggtcgcgcgggcagcggcgcaagatggcccaggagaaccccaagatgcac
aactcggagatcagcaagcgcctgggcgccgagtggaaggtcatgtccgaggccgagaag
cggccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggat
tacaagtaccggccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctg
gccggcgggctgctggcggcgggcgcgggcggcggcggcgcggccgtggccatgggcgtg
ggcgtgggcgtgggcgtgggcgcggcggccgtgggccagcgcctcgagagcccgggcggc
gcggcgggcggcggctacgcgcacgtcaacggctgggccaacggcgcctaccccggctcg
gtggcggcggcggcggcggccgcggccatgatgcaggaggcgcagctggcctacgggcag
cacccgggcgcgggcggcgcgcacccgcacgcgcacccggcgcacccgcacccgcaccac
ccgcacgcgcacccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcag
tacagccccatctccaactcgcagggctacatgagcgcctcgccctcgggctacggcggc
ctcccctacggcgccgcggccgccgccgccgccgccgcgggcggcgcgcaccagaactcg
gcagtggcggccgcggcggccgcggcggccgcgtcgtcgggcgccctgggcgcgctgggc
tcgctcgtcaagtccgagccgagcggcagcccccccgcccccgcgcactcgcgggcgccg
tgccccggggacctgcgcgagatgatcagcatgtacttgcccggcggggagaccggcgac
ccggcggccgcggcggcggcggcggcgcagagccggctgcactcgctgccgcagcactac
cagggcgcgggcgcgggcgtcaacggcacggtgcccctgacgcacatctag
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