Vulpes lagopus (Arctic fox): 121477152 Help Entry 121477152         CDS       T07435                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism vlg  Vulpes lagopus (Arctic fox) Pathway vlg04151   PI3K-Akt signaling pathway vlg04510   Focal adhesion vlg04512   ECM-receptor interaction vlg04820   Cytoskeleton in muscle cells vlg04926   Relaxin signaling pathway vlg04933   AGE-RAGE signaling pathway in diabetic complications vlg04974   Protein digestion and absorption vlg05146   Amoebiasis vlg05165   Human papillomavirus infection vlg05200   Pathways in cancer vlg05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:vlg00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     121477152 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121477152 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121477152 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     121477152 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     121477152 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     121477152 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     121477152 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     121477152 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     121477152 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     121477152 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     121477152 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vlg04147]     121477152 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:vlg00536]     121477152 (COL4A1) Exosome [BR:vlg04147]  Exosomal proteins   Exosomal proteins of other cancer cells    121477152 (COL4A1) Glycosaminoglycan binding proteins [BR:vlg00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121477152 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  121477152 NCBI-ProteinID:  XP_041587320 LinkDB All DBs Position 16:2820777..2959367 Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPHGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDSGYPGLPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGP KGFPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGVSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGNPGQPGLTGEVGEKGQKGDSCLICDMAGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPVGDKGQAGFPGIPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFQ GPQGDRGFPGTPGRPGLPGEKGTIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGPPGLQGI RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGEQGISGFPGSPGE KGEKGSAGVPGIPGSPGPKGLPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGQ PGPTGPAGQKGEPGSDGIPGSVGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP GIPGSKGEPGFLGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPG LDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG LPGLQGAKGDQGDQGFPGSKGLPGPPGPPGPYDIVKGEPGLPGPEGPAGLKGLPGPPGPK GQQGVTGSVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtgtggctgctgctgctgcccgccgccctcctgctccacgag gagcgcagccgggccgccgccaagggtggttgtgctggctctggatgtgggaagtgtgac tgccatggagtgaaaggacagaagggtgaaagaggactcccagggctgcaaggtgtcatc gggtttcctgggatgcaaggacccgagggaccacatgggccaccaggacaaaagggtgat actggagaacccggactgcctggaacgaaagggacaaggggacccccaggagcatcgggt taccctggaaacccaggactgcctggcattcctggccaagacggcccccccggtcctcca ggtatccctgggtgcaatggaacaaagggtgagccagggcctctagggcccccgggtttg cctggattcgctggaaatcctggaccaccggggttaccaggaatgaagggagatccaggt gaaatcattggccatgtgcctgggaccctgctgaaaggcgaaagaggatttcctggaccc ccaggaacaccaggctcgccgggactgccggggttgcaaggtcctgttggccctccagga tttactggaccaccaggtcccccaggccctcctggccctccaggtgaaaagggacaaatg ggcttaagttttcaagggccaaaaggtgacaagggtgaccaaggggtcagtgggccacca ggagtgccaggacaagctcaagttcaagaaaaaggagactttgccactaaaggagagaag ggtcaaaaaggtgaacctggatttcaggggatgccaggggttggagagaaaggtgaacct ggcaaaccagggccccgaggaaaacctggaaaagatggtgaaaagggagaaaaagggagt ccaggctttccaggcgactcggggtatccgggactcccaggccgtgaaggtttcaaggga gacaaaggtgaagcaggtcctccaggcccacccggcattgccatcggccctggacccttg ggagagaaaggagagcgtgggtacccaggtgccccagggttgagaggagagccaggcccc aaaggtttcccaggattgcaaggccagccaggccctccaggcttcccagttccaggacag gctggtgctcctggcttccctggtgagagaggagagaaaggtgaccaggggtttccaggt gtatcattgccaggaccaagcggacgggatggactcccaggcccccctgggcctcctggg ccccctggacagccaggccacacaaacggcattgtggaatgccagcctggaccaccaggg gatcagggtccccccggaaatccagggcagccagggctgacgggcgaagtcggagaaaaa ggtcagaaaggagacagctgcctcatctgtgacatggcaggacttcgggggccccctggg ccacagggccccccgggagagataggtttcccggggcagccaggggccaagggtgacaga ggcttgcccggcagagatggtctggaaggattgcctggtccgcagggtgtaccggggctg atgggccagccaggagccaagggagagcctggcgagatttacttcgacgcccgactcaaa ggagacaagggagacccgggctttccaggacagcctgggatgccaggcagagcagggtct cctgggagagatggccatccggggctgccaggccccaaaggctccccgggttcagtagga ttgaaaggagagcgtggacctcctgggggagttggattccccggtagtcgcggtgacatc ggccctcctgggcctccagggtttggccccattggccccgttggtgacaaaggacaagca ggttttccggggatccctgggtccccaggccagccaggtcccaagggtgaagcaggaaaa gttgtgcccctacctggtccccctggagcacagggacttccaggatccccaggtttccaa gggccgcaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccgggagag aagggaactatcggccagccgggaatcggatttccagggcctcccggccccaaaggtgtt gatggcttacccggagacgtgggacctcctgggagtccaggtcgcccgggatttaatggc ttacctggcaacccaggtgtgcctggccaaaagggagagccaggaattggtctgccagga ctcaaaggattacctggtcttcctggcattcctggcacacccggggaaaaggggaacatt ggaggaccaggcgttccaggagagcatggtgctattggccccccaggccttcagggaatc agaggtgacccaggaccacctggattacaaggtcccaaaggagctccgggagttcctgga atcggcccccctggagcaatgggcccccctggaggacagggaccaccagggtcctcaggc cctcctggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccgggc cccaaaggagataaagggtcccaagggctgcctggcctgacaggacagtcgggactccct ggtcttcctggacagcagggcacaccaggagttccagggtttccaggtcccaagggagag atgggcgtcatggggaccccagggcagcctggctccccaggaccagcaggcctgccagga ttgccaggagaaaaaggagaccacggcttcccaggctcctcgggacccaggggagaccct ggcttcaagggggacaaaggtgacgtgggtctgcccggcaagcctggctccatggacaag gtggacatgggcagcatgaagggtcagaagggagaccaaggagagaaaggacaaattgga ccaactggtgataaaggatcccggggagatcctggaaccccaggagtgcctggaaaggat gggcaggcagggcatcccgggcagccaggacctaaaggtgacccaggcattggcggaacc ccgggtgctcctggactccctgggcccaaaggatcagttggtggaatgggcctaccagga acgcctggagaaaaaggtgtgcctggaatccctggcccacagggtgtccctggcttacct ggggagaaaggagcaaaaggagagaaggggcaggctggcctacctggcattggaatcccg ggccggcccggggacaagggagagcaagggatctcgggttttccgggaagtcctggagag aagggagagaaaggcagcgctggcgttccagggatacccggctctccaggccccaaagga ttgccagggactgtcggctatccaggaagccctggactgcccggagaaaaaggtgacaaa ggcctcccaggatcagatggaattcctggcatcaaaggagaagcaggtcttcctgggcag cctggccccacgggcccagccggccagaaaggggagcccggcagtgacggaatcccaggg tcagtgggagagaaaggtgaaccagggctgcccggaagaggattcccagggtttccaggg gccaaaggagagaaaggctcaaagggtgatgtgggattcccgggacaagccgggagtcca ggcattcccggatccaaaggagagccaggattcctgggccccccggggccgcaaggacag ccaggcttgcctggagccccaggccacgctgtggagggacccaagggagaccgaggccca cagggtcaacccggcctgccagggcttccgggacctgtgggacctccagggctccctggg cttgatggactcaaaggtgacaaaggaaacccagggtggccgggggctcccggagctcca gggcccaagggagagccaggattccagggcctgcctgggattggaggctctccaggcatc actggctcgaagggggatatgggacctcctggagttccaggatttcaaggtcagaaaggt ctccctggcctgcagggagccaagggcgatcaaggtgaccagggcttccctggaagtaaa ggccttcctggtcccccgggccccccagggccctatgacatcgtcaaaggcgagccaggg cttcctggtccagagggtcctgcaggtctgaaggggctcccgggacctccaggccccaaa ggacagcaaggtgtgacaggatccgtgggcttacctggaccaccaggtattcctggtttt gacggtgcacctggccagaaaggagagactggacccttcggcccccctggtccaagaggg tttccaggcccaccaggccctgatgggttgccaggatccatgggtcccccgggcacccca tctgtggaccatggcttcctcgtgactaggcacagtcaaacaacagacgacccacagtgt ccacctgggaccaaaattctttaccacgggtactccttgctctacgtgcaaggcaacgaa cgggcccatggccaggacttgggcacggcggggagctgtttgcgaaagttcagtacgatg cccttccttttctgcaacatcaacaacgtgtgtaacttcgcctcccgaaacgactactcc tactggctatccacgccagagcccatgcccatgtccatggcacccatcgccggggacaac atcaggccatttattagcaggtgcgcggtgtgtgaggcgccagccatggtgatggctgtg cacagccagaccattcagatcccgcagtgccctagcggctggtcctccctctggatcggc tattccttcgtgatgcacaccagcgccggcgccgaaggttctggccaagcccttgcgtct cctgggtcttgcctggaagagtttcgaagtgcgccattcatcgagtgccacggccgtggg acctgcaactactacgccaatgcttacagcttctggctcgccactatcgagagaagcgag atgttcaagaagcccacgccatccaccttgaaggcaggagagctacgcacacacgtcagt cgctgccaagtctgtatgagaagaacgtaa

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