Vulpes lagopus (Arctic fox): 121477240
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Entry
121477240 CDS
T07435
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04390
Hippo signaling pathway
vlg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
121477240 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
121477240 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121477240 (SOX2)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121477240 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121477240
NCBI-ProteinID:
XP_041587348
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Position
17:complement(27296853..27299392)
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AA seq
322 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGGGNSAAAAAGGNQKNSPDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQ
DQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGM
ALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMS
QHYQSGPVPGTAINGTLPLSHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcaactcggccgcggcggcggcgggcggcaaccagaag
aacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcag
cggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctg
ggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaag
cggctgcgcgcgctgcacatgaaggagcacccggattataaataccggccccggcggaaa
accaagacgctcatgaagaaggataagtacacgctgcccggcgggctgctggccccgggc
ggcaacagcatggccagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccag
cgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcag
gaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcag
cccatgcaccgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacc
tacatgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccccggcatg
gcgctgggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtggtt
acctcctcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagc
atgtacctccccggcgccgaggtgccggagcccgccgcccccagcagactgcacatgtcc
cagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcg
cacatgtga
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integrated database retrieval system