Vulpes lagopus (Arctic fox): 121477424
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Entry
121477424 CDS
T07435
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121477424 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121477424 (VPS8)
Membrane trafficking [BR:
vlg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121477424 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
121477424
NCBI-ProteinID:
XP_041587628
LinkDB
All DBs
Position
17:complement(24262564..24511927)
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AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPVVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLRPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
LLQMSPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEITHQDEKSKEDLSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSAAPHLHPEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKGGKLSE
NSSEIKKGKTTSSQVKMSPSCHPSKGDSTVKKAASEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQNRSSETYRPFSGSQSGSAFSSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctttgtgccaagactactgaa
gaagagctgaataagtctttcaatcttgaagcttccctttcaaaattctcttacatagat
ttggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactccaccaacactggaaagcatactcaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcctctgtggcaagttcagatagtggtgacaggaccaacctaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagctgtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgcaaaa
ggacagatcacgatgtgggatttggccagtggaaaacttctaagatcaataacagatgct
catcctccaggaacagctatactgcatattaagtttacagatgatccaactcttgcaatt
tgcaatgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acatgtgaatctagatgtctgttcagtggttccaagggtgaagtttgctgtattgagcct
ctccattcaaagcctgagttaaaagatcatcccatcacacagttttccttattggccatg
gcgtccttaacaaagatactggtcattggattgaaaccatctttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggca
gtgcataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgagtctggagcaatacacgttactaagcaaaagcaccttcatctc
tactatgatctcatcaactttacttggataaactcacgcacagttgtgctcttagatagt
gtggagaagttgcatgtgattgatcggcagactcaagaggaattggaaacagtggagatc
tcagaggttcagttggtctataatagcagccatttcaaatccctagccaccggaggaaat
gttagccaagcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccagtaag
cgaaaggctgttgttgcagatcggatggtagaaatcctattccattatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatg
gtacctgtcatagttgattactgcctgctgttgcaacgaaaggatcttttatttagccag
atgtatgataaactaagtgagaactcagtggccaaaggagtgtttttggagtgccttgag
ccatatattttaagtgataaattggtggggatgaccccccaggtaatgaaagacttgatt
gttcatttccaagataaaaagttgatggaaaatgtggaagccctaattgtacatatggat
atcaccagcctcgatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gccatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaggacactaacagatgagcaagttgtt
atgggcaacaagcttctcgtatatattagctgttgtcttgcaggccgagcctatcctctt
ggtgacatccctgaagatcttgttcccgtggttaaaaaccaggtttttgaatttctgatt
cgcctgcattcagcagaagcttcccccgaggaagaaatctacccctatgttcgaactctg
ctacattttgacacaagagaatttctaaatgttttggcactgacttttgaagattttaaa
aatgacaagcaagctgtagaatatcaacaacgaattgtggatattttgttgaaagttatg
gtggagaattctgattttactccctcacaagtagggtgtctctttacattccttgcccgg
cagcttgcaaagcctgacaataccttatttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgcagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gagttgctgcaagctggaggcatagttcagtttgaagagagtcggcttatccggatggca
gaaaaagcagaattctatcaaatttgtgagtttatgtatgaacgagaacaccaatatgac
aaaataatcgattgctacttacgtgacccactaagggaggaagaagtctttaactatatt
cacaatatattatccattcctggacacagtgcagaggagaagcaatctgtatggcagaaa
gcaatggatcatattgaggaacttgtatccctgaggccctgtaaagctgcagaactggtt
gctactcacttttctgaacagattgaaacagtcattaaaaaactccagaaccaagttttg
cttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaagaa
ttgctgcagatgtctccctgtgttacggagcagttcattgagctgctatgtcagttcagc
ccaaaccaggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccaaaagtatcaacttcatgaagtcactgcctatctattagaaaaaaaagga
gatattcatggtgccttcttaataatgctaaagagactacagagcaaacttcaagaaata
acacatcaagatgaaaaatccaaagaagatctttcactgaaggatgttgaagataccatg
gtagagacaattgccctttgccagagaaattcacataatttgaaccagcagcaacgagag
gcgctctggtttccattattggaggcaatgatggctcctcagaagctgtctggttcagct
gcgcctcatctacaccctgaagctctgaaatctttgaccatgcaagttctaaacagcatg
gcagcatttattgctcttccatcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccaggggcttattctgggaatgttggatacctttaattat
gaacaaaccctgctggaaacaactactagccttctaaaccaagatcttcattggtcactg
tgtaacctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctata
tgtttgcagcaatacaagagacgccaagaaatggctgatgaaatcattgtctttagctgt
ggccatttgtatcactcattctgtctgcaaaacaaagagtgcaccatagaaactgagggg
caaacaagatggacatgctacaaatgcagctcaagtaacaaaggagggaaactaagtgaa
aattcatctgaaattaaaaagggaaagacaacctcatcacaggtaaaaatgtctccttct
tgtcatccatccaaaggagattctactgttaagaaggcagcctcagaacccgttctggat
ccacagcaaatccaagcatttgatcagctctgccgtctctaccgaggaagttcccggctg
gctctcctcacagaactctcccagaatcgcagcagtgagacctacaggccattcagtggc
tcccagagtggctctgctttcagcagcatcttccagaatgagaatttccagctgcagctc
attcccccacctgtgactgaggactga
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